Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0992 ATGGCGACGGAGCAGTTGATGTCCGATGGTGGTCCCCGCTACGTTCAAATGCAATCGGAGTCATCGACGGCGATTTCTTCTTCTGCGTCATTCCGGTTTGGCGGTGGCACTGAGCATACTCGAATTTTCGATGAGTTGCCAGAAGCCACCATCGTCTCCGTATCTCGTCCGGATGCCGGCGACATCAGTCCCATGCTTCTTTCTTACACAATAGAGTTTCGTTATAAACAGTTCAAGTGGCAATTGGTGAAGAAGGCTTCTCACGTATTTTACCTGCATTTTACATTGAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGGAGAACACACTGCTGTGGTGCAAGATGATGATGAAGCTGATGATGAAACTGTTCATCTACATCATGATGAAAGTGCTAAGGACAGAGATGTCCCATCTAGTGCTGCTCTACCAATTATACGGCCAGCCTTAGGAAGACAGGATACTATGTCAGATAGAGCCAAGACTGCAATGCAAGGATATTTGAATCACTTTTTAGGAAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTCTGGAGGTGTCAAAGTTGTCTTTCACAACTGAGTATGGCCCTAGCCTGAAGGAAGATTATGTGATGGTGAAGCATCTGCCAATAATTCCTAAGGATGATGATTCCAGAAAGTGTTGTTTATCTCGGTGTTTTAGTTGTTGCAATGACAATTGGCCAAAGGTTTGGGCTGTCTTAAAACCTGGATTCTTGGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGACATAATTGTTTTTGATGTTCTACCTGCCTCAGATGGGAATGGGGATGGTCGTTTATCATTGGCAAAAGAAATGAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAAACCGGGGCATTAGGATAAGAGTAAAAAATAGTGGTAAAGTCAAAGATTGGGTAGCTGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGATGGTGTCATCCTCATCGCTATGGTTCATTCGCTCCTCCAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTTGATGGCAGGGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATTTGTGGGTGGTGGGTTTGCCCGGAACTGTATTTGCGGCGTCCTTTTCATACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATCTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATTAACAGTGTCTATAGCAAGAGAAAGCTTCTCAGCATTCATGAAAATGTGAGGGTACTACGCTATCCTGACCATTTTTCTTCTGGTGTTTACCTGTGGTCACACCATGAAAAACTGGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGATTGGATTTATGCTTTGGTCGTTATGATACATCTGAACACAAAGTGGGAGACTCCCCTCCACTGATATGGCCAGGAAAAGACTATTATAACCCTAGAGAATCTGAGCCAAATTCATGGGAAGATGCAATGAAAGATGAATTTGATCGTGTAAAATATCCTCGAATGCCATGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGGTGGAATTATGCAAAGAGGAACAAAGCTCCAAATGAGCAAGCAATTCCATTGCTTATGCCTCAGCATCATATGGTTATCCCACACTACTTGGGAAGAAACAGAGAGATGGAGATTGAAAGCAAGAATACTGACTATCATATAGGCATGAAGAGGGAAGATTCTTTTTCCTCATCCCAAGATGTTCCGCTACTTTCACCTGATGACTCTGGTGGGATGGATGCTCCTGTAGGAGACACTGCATTAAATGAGTTAAGTTCCTTTTTACATCACCTTGACCGGCCAACCAGGGTCAGCAGTGGACGTCCTTTTCCTTTCCGGAAGGCCCAAATTGAACCAATAGGTCTAGATACACCAATGAGGGGCTTTGTAGATGATCTTGACTCTGTGGATCAACATGGGAAGATGCCTATGGATAGAGTAGCTCACATTAGTGTACATAACTCAGGTCCAGAATGGTGGGAGACACAAGAACGGGGTGACCAAGCGAGTTTTGTAGATGAATCTGGCCAAGTTGGTCCCCGTGTTTCCTGCCGTTGTCAGGTTATTCGGAGTGTTAGTCAATGGTCTGCTGGAACTAGCCAAACGGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATACGAAATCGTGTTTTGGAAGCTTTATATCGACGGATTTTGCGAGCTTACCATGACAAAAAATCTTTTAGGGTTATAATTGTCATACCCCTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGCGGTGCAGCATCCGTCAGAGCAATAATGCATTGGCAGTATCGAACCATATGCAGAGGACAAAATTCTATATTACATAATCTATTAGAATTTCTTGGTTCAAAAATACATGATTACATCTCTTTCTATGGCCTTAGGGCTTATGGTAGACTCTTTGATAGTGGTCCTGTGGCAACGAGCCAGGTATATGTTCACAGTAAAATCATGATTGTTGATGACTGTACAACATTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGATCCAGAGATTCTGAGATCGGTGTAATTATAGAAGACAAAGAATCGATTGATTCGTTTATGGGTGGAAAACCATGGAAAGCAGGAAAATTCTCTCTAACTCTGCGGTTGTCGTTATGGTCTGAACACTTAGGTCTGCAAGCAGGGGAGATCAATCGAATAATGGACCCAATTGCTGAGTCGACATATAAGGATATTTGGATGGCAACTGCAAAGACAAATACGGCAATTTATCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAAGCAAAGCACAGCTCTCTGGAAAGAAAGAATCGGCCATACTACCATTGATTTAGGAATAGCCCCAGAAAATTTAGAATCCTACCATGATGGAGGTATCAAGAAAACTGACCCTTTTGAAAGATTGGCATCAGTAAAGGGTCATCTTGTTTCCTTTCCCTTGGAGTTCATGTGTCAAGAAAATCTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTACTCAGATTTGTAAAAGAAAGGGATGGAAGCTGCTTATAAATAGTGGAACCAGGGCTGAAATACTTCTAACTCGTCCTGTCAGGGGTGAAAGGCGACTCGTCAATGATCGTTCAGAGAAGGCGGGTCGTGCCGACACCTTAATGGAGAACACACCTCTTTAA 3477 0.4268 MATEQLMSDGGPRYVQMQSESSTAISSSASFRFGGGTEHTRIFDELPEATIVSVSRPDAGDISPMLLSYTIEFRYKQFKWQLVKKASHVFYLHFTLKKRAFIEEIHEKQEQVKEWLNNLGIGEHTAVVQDDDEADDETVHLHHDESAKDRDVPSSAALPIIRPALGRQDTMSDRAKTAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTTEYGPSLKEDYVMVKHLPIIPKDDDSRKCCLSRCFSCCNDNWPKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEMKERNPLRHSFKVTCGNRGIRIRVKNSGKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFVDGRAAFEAIASSIEDAKSEIFICGWWVCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTSEHKVGDSPPLIWPGKDYYNPRESEPNSWEDAMKDEFDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGRNREMEIESKNTDYHIGMKREDSFSSSQDVPLLSPDDSGGMDAPVGDTALNELSSFLHHLDRPTRVSSGRPFPFRKAQIEPIGLDTPMRGFVDDLDSVDQHGKMPMDRVAHISVHNSGPEWWETQERGDQASFVDESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRILRAYHDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLLEFLGSKIHDYISFYGLRAYGRLFDSGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDKESIDSFMGGKPWKAGKFSLTLRLSLWSEHLGLQAGEINRIMDPIAESTYKDIWMATAKTNTAIYQDVFSCVPNDLIHTRLAFKQSTALWKERIGHTTIDLGIAPENLESYHDGGIKKTDPFERLASVKGHLVSFPLEFMCQENLRPAFNESEYYATQICKRKGWKLLINSGTRAEILLTRPVRGERRLVNDRSEKAGRADTLMENTPL 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0992 1158 Coils Coil 98 118 - -
Lele47g0992 1158 Gene3D Endonuclease Chain A 364 600 - -
Lele47g0992 1158 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Lele47g0992 1158 Pfam PLD-like domain 780 955 IPR025202 -
Lele47g0992 1158 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Lele47g0992 1158 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Lele47g0992 1158 PANTHER PHOSPHOLIPASE D 175 1100 IPR015679 -
Lele47g0992 1158 SUPERFAMILY Phospholipase D/nuclease 330 596 - -
Lele47g0992 1158 FunFam Phospholipase 741 961 - -
Lele47g0992 1158 SUPERFAMILY PH domain-like 248 340 - -
Lele47g0992 1158 CDD PH_PLD 193 340 - -
Lele47g0992 1158 PIRSF PLD_euk 615 1109 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele47g0992 1158 PIRSF PLD_euk 50 620 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele47g0992 1158 Gene3D Endonuclease Chain A 701 965 - -
Lele47g0992 1158 Gene3D - 244 342 IPR011993 -
Lele47g0992 1158 SUPERFAMILY Phospholipase D/nuclease 747 955 - -
Lele47g0992 1158 SMART pld_4 477 504 IPR001736 GO:0003824
Lele47g0992 1158 SMART pld_4 907 934 IPR001736 GO:0003824
Lele47g0992 1158 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824
Lele47g0992 1158 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0992 Lele-ChrLele47 15875335 15887296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0992 1 987 Phospholipase D Gene Family (Wang group) AT3G16785 73.668 0.0 1412