Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0988 ATGCGTTTGAAAACATTTCGAAGTTCAAGACGCTTAACGGCGGCGCGGGCAACCCAGGGAAGAAAAGTGCCTGTTGCCCTCATTGCTATTGCAAGTAGTTTTGCTCTTTCGCTTCCGAGAATGCGTTCATCAAACATAAGAGACGTTTTAACAGCGTTTAGTCCTTCGTTAGACTTGTTTGCTGTCAGCGCTGGAGATGGTCGCATAAAGGTATGGGATACACTAAATGGTCAAATCCAGACGGAGTTTGCAGACATCACATCAGGTGATGCAACAAATATATATGCAGGATCAATGAAGGGCCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCTTTGGAAGGAAAGAGAAAAAGGAAACACACATCCTCATTGTTAGTACTTGGAACAGGTAGTGGTGACGTGTTGGCACTTGATGTGTCTGCTGGCCAATTAAATTGGAGAATTGATGACTGCCATCCCGGGGGCGTGAAAGCTGTTTCATCTTCTACAAATGGATCTTGTGTTTATACTGCAGGTGCAGATGGAATGATTTGTAAGATTGATTGCAAGACAGGAAACCTGTTGGAAAAATTCAAAGCTTCTACAAAGGCAATATCCTCTATGTCTGTTTCTTCAGATGGGAAGAACATAGCTACTGCAGCAGCACAACTGAAGATTTTTAATTGTTCTGATCACAAAAAGATACAGAAGTTCTTTGGTCATCCTGGATCTGTTCGTTGTCTTGTCTTCACTGAAGATGGGAAGTATATTCTATCCTCTGCTGTTGGTGAAAGATATGTTGCTGTCTGGAGGATTGATGGGGCAAAAAAGAAGTCAGTTAGTTGTGTTCTTGCAATGGAGCATCCTGCTGTTTTTCTTGATAGCAGGTGCACTCCTAGCAGGGAGCTTGACAATGTTGGCGTATGTGTTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGATTGGAAATAGTATTGAGGAATTACGTGATGTGAAGCCCACTAAAATATCATTATCTTTGGAAGACATATCCTCCAGAAATTACAAGGGTGCATTGCCAGCAATATATGCTGCAAAGTTAGAAAGCATTAACGATCCTACCTCTGGGCAGGTTTTACTTGTTCATGGGTTGCTTGTAAAACCATCATTTCAAAAAATTTCGGTGCAATCTGGCTCAGACATAAAATTAAATTTCTCTGATGATGGTATTCTTCTTCGGCTGAACAAGTCCCTCGTAAAGTCTAGGAAGGCAAAAGATTTAAAGAAAGTTACTGCACTTGACCGTGCTAATGCGGAGGACGCCTTGCTCCCAATTCCTAAGCTTTTTGATTCTCACGTGCAAGAGAAAGAATTTCAAGACTCTTCAGGCAAGGAGGTTATGGATGATTTGGTTAGAAGTAGTGAATATGTGTCTATGGAGATTGAAGATGGGATGGCCCAGGGCGAGACTGATGTGATCTGCATGGAGGACAAGATGAGATCTCTGGGGATACTTGATGATGAAAATGATCTTGAATCAAATATCAAATTTAGTTCTTCATTGTTGAAGGGTGTTGATCTTGAAGCTACTATTCCAATGAGAAAGATAAGAGCAACTATCTTGACTATGGAGCCATCTGAAGCATATAAGCTCCTGGAAGTTTTGCTGACTCTTTGGCAATCAAGGTCATCTACCGGCAAGTGCGCTCTTCCGTGGATATATAGCATATTAGTGATTCATGGTCACTCCTTAATTTCTCAGGAAAATGTGACTCATATGCTTGATTCCTTGACCAAGATGGCTGGCTCTAGGGGATCTGCAGTGGAGGCATTGTTACAATTATCAGGTCGTCTGCAATTGGTGACGACACAGATTAACAAAGCTTCTAAAAATACAACTCATTCAGGGGGAAATCCTCAAATGGAAGAAAGCGAAGATGAGGACAAAGATGAATATCTGGAGGATGAAGGAGATGATGAATCTGAAATAAGTAGTGATGATGATGACAGCTAG 1986 0.4129 MRLKTFRSSRRLTAARATQGRKVPVALIAIASSFALSLPRMRSSNIRDVLTAFSPSLDLFAVSAGDGRIKVWDTLNGQIQTEFADITSGDATNIYAGSMKGHLSIDYTCMKWLSLEGKRKRKHTSSLLVLGTGSGDVLALDVSAGQLNWRIDDCHPGGVKAVSSSTNGSCVYTAGADGMICKIDCKTGNLLEKFKASTKAISSMSVSSDGKNIATAAAQLKIFNCSDHKKIQKFFGHPGSVRCLVFTEDGKYILSSAVGERYVAVWRIDGAKKKSVSCVLAMEHPAVFLDSRCTPSRELDNVGVCVLAISEVGDCYVWIGNSIEELRDVKPTKISLSLEDISSRNYKGALPAIYAAKLESINDPTSGQVLLVHGLLVKPSFQKISVQSGSDIKLNFSDDGILLRLNKSLVKSRKAKDLKKVTALDRANAEDALLPIPKLFDSHVQEKEFQDSSGKEVMDDLVRSSEYVSMEIEDGMAQGETDVICMEDKMRSLGILDDENDLESNIKFSSSLLKGVDLEATIPMRKIRATILTMEPSEAYKLLEVLLTLWQSRSSTGKCALPWIYSILVIHGHSLISQENVTHMLDSLTKMAGSRGSAVEALLQLSGRLQLVTTQINKASKNTTHSGGNPQMEESEDEDKDEYLEDEGDDESEISSDDDDS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0988 661 PANTHER OS03G0300300 PROTEIN 41 660 - -
Lele47g0988 661 MobiDBLite consensus disorder prediction 634 661 - -
Lele47g0988 661 MobiDBLite consensus disorder prediction 618 661 - -
Lele47g0988 661 ProSiteProfiles Trp-Asp (WD) repeats profile. 52 82 IPR001680 GO:0005515
Lele47g0988 661 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 52 271 IPR011047 -
Lele47g0988 661 SMART WD40_4 187 224 IPR001680 GO:0005515
Lele47g0988 661 SMART WD40_4 227 267 IPR001680 GO:0005515
Lele47g0988 661 SMART WD40_4 144 184 IPR001680 GO:0005515
Lele47g0988 661 SMART WD40_4 39 73 IPR001680 GO:0005515
Lele47g0988 661 Pfam Dip2/Utp12 Family 521 613 IPR007148 -
Lele47g0988 661 Pfam WD domain, G-beta repeat 231 266 IPR001680 GO:0005515
Lele47g0988 661 Pfam WD domain, G-beta repeat 46 73 IPR001680 GO:0005515
Lele47g0988 661 Gene3D - 42 340 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0988 Lele-ChrLele47 15842468 15848817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0988 155 266 U-box Gene Family AT2G33340 26.724 2.86e-06 48.5