Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0978 ATGCCTTACCACTTCCGGGAAAGATGCCTTGTCTTCATAGTCCCCGTCTTTATCATCTTCTTTGGCCTGACGCCGTCGATTTCTCTGGCTCAGTCCGCCGATTCCTGCAACGGGATATTCTTGTCCTACGTCTACACCGGGGGAAGACAGCTGCCTCCTAACGTCTCCGATTCCGGAAAGCAGCCGCACCGGTTCGAGTCTACTCTCACTGTGCGCGACAATGGACTCTACGAGTTTAAGTCCTGGAAGGTTTTTGTGGGGTTTCAGCACGACGAGTATTTGGTCTCTGCATCAAACGCAGTGCTTGCCGACGGCGCTAACTTACCTGCCAACGTCGGAAACGGCACTATTCTTGCAGGATTCCCCACGACCGACCACAAGACTGCCGCAGAGACTGCTGGGGACTTGACACAGATGCAGGTTCAGATCAATTTAGTGGGGACACAGTACGGTGTCGTGTCGCCGGCGGTGCCGCTGCCGTCGAACATCACTCTCGCCAATGACGGGTTTGTTTGTCCCAAGTCCACTGGACGAGGGAATCAGACTCAGGTCTGTTGCACAAGAGATTCCAATTTCAAGACAACCATCACCACAGACCAAGAGTTTCTACCTCGTCAGAGTGGTGATCTTTCAATTATTTACGATGTGACAAGTACTTATGAATCCAATTATTGGGCTGACGTTACAATCTCAAACCATAATCCACTTGGTCGTCTTGATAACTGGAGATTAAGCTGGGAATGGATGAGACAAGAATTTATCTATTCAATGAAAGGTGCTTATCCTTCTGTGGTTGATCCTTCTGAGTGTATCTTTGGCTCCCAAGGTGGACACTACCAAGACCTTGACTTTTCCAATGTGTTGAGTTGTGAAAAAATTCCAACAATAATTGATCTCCCTCCGACAAGGTACAATGATTCAAACCTCGGAAAAATCCCTTTTTGTTGCAGGAATGGAACTATCTTGCCTCCATCAATGGACCCAAGTAAGTCATCTTCAAGGTTCCAAATGCAAGTCTACAAAATGCCGCCAGACCTCAACCGTTCAGTGCTAACTCCACCACAGAACTGGAAGATAAGTGGCACACTCAATCCTGACTACAAATGTGGCCTTCCGATTCGTGTGAGCCCAAGCGAAAACCCGGATCCTTCAGGTTTACCTTCTAACATATCCTCAATAGCTAGCCGGCAGGTTGTGTGCAATATAACAAAGGACACTGGGGCTGCAAGAAAATGCTGTGTCTCATTTTCTGCTTATTATAATGAATCTGTCATTCCTTGTAAGACAAGTGCATGTGGATGCACAGGCAACACAGGAAGAACATGTAGTACGAATACACCAGCCATGTTGCTTCCACCTGAGGCACTTCTTGTTCCATTCGAGAATCGCCGCGCCATGGCTGGTTCTTGGGCTGACATGAAGCATTTTACAGTGCCAAATCCAATGCCCTGTGGAGATAACTGTGGGTTGACCATAAATTGGCATGTTCTTACAGATTACAAAAAAGGTTGGACTGCAAGAATAACTCTTTTCAACTGGGGTGAGACTGCTTATGCAGATTGGTTTGTTGCAGCAGAAATGAACAAAGCTGGTCCAGGTTTTGAGAAGATGTATTCTTTCAATTCAGATGGAGATGATCCTGAGAGAGACCCTAGGGTGCCTGGGAAACAACAATCAGTGATCTCATTTACAAAGAAAAGTACTCCTGGAATCAATGTGGTTGGTGGAGATGGGTTTCCCACTAGAGTTCTCTTCAATGGTGAAGAATGCTCCCTTCCTTCTGTATTTCCAAGCAGTGGTTTCCAGAAAGAATTTTCTCTGTTCTTAACACTATCACTACTGCTGTTCATCATCTTGATGTAG 1863 0.4638 MPYHFRERCLVFIVPVFIIFFGLTPSISLAQSADSCNGIFLSYVYTGGRQLPPNVSDSGKQPHRFESTLTVRDNGLYEFKSWKVFVGFQHDEYLVSASNAVLADGANLPANVGNGTILAGFPTTDHKTAAETAGDLTQMQVQINLVGTQYGVVSPAVPLPSNITLANDGFVCPKSTGRGNQTQVCCTRDSNFKTTITTDQEFLPRQSGDLSIIYDVTSTYESNYWADVTISNHNPLGRLDNWRLSWEWMRQEFIYSMKGAYPSVVDPSECIFGSQGGHYQDLDFSNVLSCEKIPTIIDLPPTRYNDSNLGKIPFCCRNGTILPPSMDPSKSSSRFQMQVYKMPPDLNRSVLTPPQNWKISGTLNPDYKCGLPIRVSPSENPDPSGLPSNISSIASRQVVCNITKDTGAARKCCVSFSAYYNESVIPCKTSACGCTGNTGRTCSTNTPAMLLPPEALLVPFENRRAMAGSWADMKHFTVPNPMPCGDNCGLTINWHVLTDYKKGWTARITLFNWGETAYADWFVAAEMNKAGPGFEKMYSFNSDGDDPERDPRVPGKQQSVISFTKKSTPGINVVGGDGFPTRVLFNGEECSLPSVFPSSGFQKEFSLFLTLSLLLFIILM 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0978 620 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
Lele47g0978 620 PANTHER COBRA-LIKE PROTEIN 7 543 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0978 Lele-ChrLele47 15795420 15798048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0978 36 608 COBRA Gene Family AT4G16120 62.252 0.0 796