Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0974 ATGGTAAGAGCACCGTGCTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACGGCTGAAGAAGATAAGATATTGACAGAGTACATCGAACAACATGGTGAAGGCTCCTGGAGGAACTTGCCCATGAATGCTGCAGGACATTTACCGGGACGAACAGATAATGAGATAAAGAATTACTGGAACTCTCATTTAAGGAGAAAAATTTACTGCTTCATCAAAACCCTAAACGAATCCCTACCTTCTGTAAATGACATTGCTGCTTCCTTGAAACAAAGAGGTGGTCGGGCTAGGCCCACTCAGGCCACCATTAAGCCCAATAACCTGACTCCTTCGGCCCAAAATTTCCACTCCCACAGTAATGCAGGCAAGGGGTTCGAGAAAATGTCCAAACCAATCCCAAACCCACAAACTTGTGCCAATAATGCAGGACCTGGAGATGTTGCCATAACGGCATCTTTATATACAAGTGATGATATTCTTGAGACCATGGAACCATATCAGTGGCTAGACTGTGAGATAAAGGAGCTTAGTTACATGTTGGAAAATGGAATGTTTATGAACCCAAATGAGAATTATGAGGAACCAGAAAATGAATTAATGCTGAGCAAAAATAATGACATGGAGGGTGGAGATTTGTATGAACTTGTGGGAAAGAAAATAATGGGAGCAAGTGATGAGGATGTTATGAGCAGAAACAGTAACGTTAATTCATCAGAGATTTCTGTCTATGATTATCAGTGGCTTGACTGGGATTACAATCAACAAGATCTCTGTGAAGAAGAGAGCCTGAATGCGAACTATTTGTGGGGTGATGGAAATGGTAGTGGAGAATTTGGGGGAAGTTTGTGTTCATATTGA 858 0.4196 MVRAPCCEKVGLKKGRWTAEEDKILTEYIEQHGEGSWRNLPMNAAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLNESLPSVNDIAASLKQRGGRARPTQATIKPNNLTPSAQNFHSHSNAGKGFEKMSKPIPNPQTCANNAGPGDVAITASLYTSDDILETMEPYQWLDCEIKELSYMLENGMFMNPNENYEEPENELMLSKNNDMEGGDLYELVGKKIMGASDEDVMSRNSNVNSSEISVYDYQWLDWDYNQQDLCEEESLNANYLWGDGNGSGEFGGSLCSY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0974 285 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Lele47g0974 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Lele47g0974 285 CDD SANT 16 64 IPR001005 -
Lele47g0974 285 Gene3D - 11 69 - -
Lele47g0974 285 MobiDBLite consensus disorder prediction 90 113 - -
Lele47g0974 285 Pfam Myb-like DNA-binding domain 14 64 IPR001005 -
Lele47g0974 285 SMART sant 13 66 IPR001005 -
Lele47g0974 285 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 44 - -
Lele47g0974 285 SUPERFAMILY Homeodomain-like 8 68 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0974 Lele-ChrLele47 15740788 15743210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0974 1 185 MYB Transcription Factor Family AT2G47460 35.319 3.64e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele47g0974 Myb_DNA-binding 7.9e-13 CL0123