Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0968 ATGAGCAAGCTAGGATCCACTGTTGCACAGAGAAAGTCAGTTAAGAAAGAGAGAGAAAGTAGGAGTCCCTGCTTTGTTTATTTTTTCCGTGACTCGAAAATTGCACAAGAAAATCGAAGAAGGATCAGAGCAGAGTGTCATTCAGCTCCGACTAGGGGCTCCTCTCAGTGTTTCTTCTTCCTAATTTCAATCCGGCCAAACCCTTCTCTTCCATCAGCTAAATTCCCCCACTCTTTTCTGCTTTTTCTGAAGGCTCTTTCAAGTCTTCTAGCTGTTAATCACATAATCTCAGTTTCATTAATCATAATCTTTGTTTTGGCCACACTAATCATATTATTGTGCTTAGAGGGGGGAATTCGGATTCTGTCGGAAGTTTCTGTGATGGCAAACAACTTAACGGGGCGGCTCTTGGGCTCAGAGATACATGGATTCCAGACAATGCAGGAGTTGGATGTTGGAATTATTATGGAGGAAGCAAGACGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGCAATTACAAAAATTTTACCATCCACGTCAAGCCAGTGACTTCGCCCAAAAGTGGTACTATTGTATTATTCGACAGGAAGAAGCTTAGGAACTTTCGTAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGTGAAGAAAACCAAAACTTTGTCCGCAGATGTTACTGGTTGCTTGATAAGAGTCTGGAGCATATTGTCCTTGTTCATTATCGTGAAACACAGGAGTCACGAGGTTCTCCAGCCGCACCTGTATATTCAAATGCTAGTTCTCCCTCTGATCTAACAACATCATGGATATTATCAGAAGAATCTGGGACCAATAAGGCATACGCTGGTGAGCTGAATGACAATTTAACTGTCAAAAGTCATGAACTGAGGCTGCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTACAAATGATCGTAACACCTCTACTACTTCCATTCCTACTAGAGGAACGGTTCCTTGTTTTCACCAAGAAAAACAAATTTTACTGAAAGGAAATTTGAGCAAGGTAGTCAACAATCAATCTGCAGAGATTCATTCTTTTGATATTCTGAACAATTCAATTGATGGGAACAATAGCGCTCAATACAACTTTCCTGAAAGTTTGAATCTTCAGATAGCCAACAGTCAATTAAATTTAAATGTACAGAGTGAACATTCTATCACCATGGGTGGTGGCAATTTTGGGGACAATATTATCAATGACACTCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAGCCATATGATAGCTGATTCACCATGTTCTATTGATGACTCAGGTCTTGAATCCTCAGTTTCATCTGTTCATGATTCATACTCATCAGGATTGGATAATCATCAACCTTCTCTGCCAGAACAAGTATTTAATATCACTGATGTGTCTCCTGTCTGGGCATGCTCCACTGAGAAAACAAAGGTCCTAATAACTGGATTTTTTCATGATGACTATATGCACCTTGCGAAGTCCAATCTGTTTTGTATCTGTGGGGATGTACCTGTTCCTGCAGAAACTGCTCAAGTTGGGGTCTACCGATGCTGGGTACAACCATATTCCCCTGGTTTTGTGAATCTCTATATGAGTATTGATGGACACAAGCCCATAAGTCAAGTTGTGAATTTTGAGTATCGTACTACTATTTTGCAAGACCCTGCTGCTTCCATAGAAGAGAGACACAACTGGGAGGAGTTTCGACTTCAGATGAGGCTTGCACATTTGCTCTTTGCTACACAAAACGGTCTTGACATCACCTCTAGCAAAGTATCGCTTGATGCACTGAAGGAGGCTAAGAAATTTGTCTCCAAGACATCTTATATTTCCAAAAGTTGGCACTACTTGATTAAGTCTACTGAAGACAACGACAAAACTCCATTTCCACAAGCAAAAGATGCCTTGTTTGAAATTGCATTGAAGACTAAACTAAAGGAATGGCTGTTGGAGAGAATTATTTTAGGTTGTCAGACTACTGAACTGGATGCCCAAGGTCAAGGTGTAATCCATTTGTGCTCCATTTTGGGATATACATGGGCTGTTTCATTATTTTCATGGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCAGCTTATTATGGAAGGGAGAAAATGGTTGCAGCTCTACTGTCTGCAAGGGCAAGGCCAAATTTGGTCACGGATCCTACTCCTCAACATCCTGGTGGAATTACTGCTGCTGATCTGGCTCAGATGAAGGGTTATAATGGCTTAGCAGCTTATCTTTCGGAAAAATCTCTGGTCGAGCAGTTCAACGAGATGAGCATAGCAGGAAATATCAGTGGCTCGCTGGAAACTACTAGCACAAGTGATCCATTAAATTCTGAGAAGCTCAACGAGGATCAGCTGTACATGGAAGATACATTAGCAGCTTACAGGATAACTGCTGAGGCTGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCACTAAAATTACGATCTCATGCAGTTGAACTTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATCCAGCATGCTTTCCGAAACTTTGAGTCGAGGAAGTCTATGGCAGCTGCTGCTCGCATCCAGCATACCTTCCGTATGTGGAAGATGCGTAGAGAATTTCTCAATATGCGCCGCCAGGCAATCAAAATTCAGGCTGCTTTCCGGGCCCTCAAGGAGCGGAAGAACTACCGCAAAATCATCTGGTCTGTTGGTGTGGTTGAGAAAGCAATCCTGCGGTGGCGTTTAAAGAGAAAGGGCTTCCGTGGCCTACATGTAAATCCTGTCCAAGAAAGGGTAGGTCAGAAGGAGGAAACAGAGTTTGTTACCGAGGAAGACTTTTTCCGGATTGGCAGGAAACAAGCCGAAGAACGTGTTGAGAGAGCTGTAGTACGTGTTCAAGCTATGTTCCGCTCTAAGAAAGCACAAGTAGATTACAGGATGATGAAACTAGCCCATAATGAAGCAAAGCTGGAACTAGAATATGAAAACCTCCTCAATTCAGAGGTTGATATGGGAGTGAAGACATAG 3159 0.4229 MSKLGSTVAQRKSVKKERESRSPCFVYFFRDSKIAQENRRRIRAECHSAPTRGSSQCFFFLISIRPNPSLPSAKFPHSFLLFLKALSSLLAVNHIISVSLIIIFVLATLIILLCLEGGIRILSEVSVMANNLTGRLLGSEIHGFQTMQELDVGIIMEEARRRWLRPNEIHAILCNYKNFTIHVKPVTSPKSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENQNFVRRCYWLLDKSLEHIVLVHYRETQESRGSPAAPVYSNASSPSDLTTSWILSEESGTNKAYAGELNDNLTVKSHELRLHEINTLEWDDLVVTNDRNTSTTSIPTRGTVPCFHQEKQILLKGNLSKVVNNQSAEIHSFDILNNSIDGNNSAQYNFPESLNLQIANSQLNLNVQSEHSITMGGGNFGDNIINDTLQSQDSFGKWISHMIADSPCSIDDSGLESSVSSVHDSYSSGLDNHQPSLPEQVFNITDVSPVWACSTEKTKVLITGFFHDDYMHLAKSNLFCICGDVPVPAETAQVGVYRCWVQPYSPGFVNLYMSIDGHKPISQVVNFEYRTTILQDPAASIEERHNWEEFRLQMRLAHLLFATQNGLDITSSKVSLDALKEAKKFVSKTSYISKSWHYLIKSTEDNDKTPFPQAKDALFEIALKTKLKEWLLERIILGCQTTELDAQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSARARPNLVTDPTPQHPGGITAADLAQMKGYNGLAAYLSEKSLVEQFNEMSIAGNISGSLETTSTSDPLNSEKLNEDQLYMEDTLAAYRITAEAAARIQAAFREHSLKLRSHAVELFSPEAEARQIVAAMKIQHAFRNFESRKSMAAAARIQHTFRMWKMRREFLNMRRQAIKIQAAFRALKERKNYRKIIWSVGVVEKAILRWRLKRKGFRGLHVNPVQERVGQKEETEFVTEEDFFRIGRKQAEERVERAVVRVQAMFRSKKAQVDYRMMKLAHNEAKLELEYENLLNSEVDMGVKT 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0968 1052 FunFam calmodulin-binding transcription activator 5 662 802 - -
Lele47g0968 1052 SUPERFAMILY E set domains 495 582 IPR014756 -
Lele47g0968 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 844 947 IPR027417 -
Lele47g0968 1052 ProSiteProfiles IQ motif profile. 920 944 IPR000048 GO:0005515
Lele47g0968 1052 ProSiteProfiles IQ motif profile. 1003 1031 IPR000048 GO:0005515
Lele47g0968 1052 ProSiteProfiles IQ motif profile. 878 907 IPR000048 GO:0005515
Lele47g0968 1052 SUPERFAMILY Ankyrin repeat 674 793 IPR036770 -
Lele47g0968 1052 FunFam Calmodulin-binding transcription activator 5 490 586 - -
Lele47g0968 1052 Pfam IQ calmodulin-binding motif 922 941 IPR000048 GO:0005515
Lele47g0968 1052 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 151 1030 - -
Lele47g0968 1052 Gene3D - 663 800 IPR036770 -
Lele47g0968 1052 ProSiteProfiles CG-1 DNA-binding domain profile. 152 278 IPR005559 GO:0003677
Lele47g0968 1052 ProSiteProfiles IQ motif profile. 897 926 IPR000048 GO:0005515
Lele47g0968 1052 SMART CG_1_2 155 273 IPR005559 GO:0003677
Lele47g0968 1052 ProSiteProfiles Ankyrin repeat region circular profile. 732 760 - -
Lele47g0968 1052 Gene3D - 898 944 - -
Lele47g0968 1052 SMART iq_5 877 899 IPR000048 GO:0005515
Lele47g0968 1052 SMART iq_5 900 918 IPR000048 GO:0005515
Lele47g0968 1052 SMART iq_5 1001 1023 IPR000048 GO:0005515
Lele47g0968 1052 SMART iq_5 919 941 IPR000048 GO:0005515
Lele47g0968 1052 ProSiteProfiles Ankyrin repeat profile. 732 764 IPR002110 GO:0005515
Lele47g0968 1052 Pfam CG-1 domain 158 271 IPR005559 GO:0003677
Lele47g0968 1052 Gene3D Immunoglobulins 490 585 IPR013783 -
Lele47g0968 1052 Coils Coil 1024 1044 - -
Lele47g0968 1052 SMART ANK_2a 732 761 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0968 Lele-ChrLele47 15675386 15687393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0968 155 1035 CAMTA Transcription Factor Family AT3G16940 54.463 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele47g0968 CG-1 1.7e-46 No_clan