Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0949 ATGGTTAGGCAGAGCGGCTTAGAGCCAGGTGCTTATCTGTGTAAGGTAATAATCCAAGGTTATTGCAAATCAGAAAGAGCAGCACTGGCATGGAGGATTTTTGAAGACATGAAGAATTCAGGTTTGATGCCTGATTCTGACGTTAAAGAATTGCTTGTGAAGAGCCTATGGAAAGAAGGGAGAAGGAGGGAAGCGGCTGCAGTGGAAGAGGGCTGTGAGCAAATAAATGAGGTCCTTCCACTTGCATTACGTGGTCATGAATGGTCCGTCAGCTCTGCAAGAAATCCCAAAACTGAAGAATCTCTGGTCGATATGTGGACATTTGTATTCAGAGTTGGCATCCATCTTTCAGATTGTTTTGGAAAGGAAATTGGTTCATGCAAGAGAAAAGTTGAACAACAGAGTTCACTACATTTGACATTATTTTCTGCTGAAGCCTCCGTTTCCAATCCAGACCTCTTAACAATGGCCGTCTTCTTCCTTCCTTCTCATACAATATTTCTTGCACTCATTTTCTTCTCCACCCCCCTTATTGCAGCTCAATCGCGAACCGAGAATGGAACGGACTTCTCATGCCCTTCTGATTCACCACCTTCCTGTGAAACGTATGTATCATACTATGCCCAGTCTCCAAACTATTTGAGTTTAGTGAACATATCTGATGTATTCGGGATCAGTCCTTTATCCATTGCAAGAGCTAGTAACTTATCAGATGAAGATAATAAGCTGGTTCCAGGCCAGCTCTTACTGGTTCCTCTGACTTGTGGTTGCACTGGAAACAGTTATTTTGCCAACATAACATACGAGATCAAGTTAGGTGATAGCTACCGCTTTCTTTCATACACTGCATTTGAGAATCTCACGAATTATCCTGTAGTGAAAGAGTTTAACCCCGGTCGAAATCCACATCTTTTGATGGGAGGCACCAAAATAGTCTTCCCTTTGTTCTGCAGGTGCCCTTCAAGAAGCCATTTGGCCAAAGGCATAAAGTTTTTGATAACGTATGTTTGGCAACCTAGTGACAATGTTAATGTCGTTAGTACCAAGTTTAATGCATCTGAGATGGACATAATGACAGAAAACAAATACCAGAACTTCACCTCTGCAGCCAACCTTCCAGTTTTGATCCCAGTGTTGCAGCTTCCAGATGTTTCTCGACTTTATCTATCACCAAAGAGAAAAGGAAACAATCATCGTCTTTCAGTTATCATAGGTATTATATTGGGATGCACTCTTCTGACTGTTCTTATAATGTTACTGGTCTATGTTTATTGTCTGAGAAAGAAAAAGATTAGTTTGAAAAAGAGTGCTTCATTTCTGGAGACAGCAGATAAGCTACTTTCTGGGGTTTCGGGCTATGTAAGCAAGCCAACCATGTATGAGTTTAGTGTAATTATGGAAGCTACCATGAATCTTAATGAACAGTGCAGGATCGGGGGATCGGTGTATAAGGCCAAAATTGACGGGCAGGTCTTAGCAGTGAAAAAGGTGAGGGAAGATTTCATGGAGGAGCTAAAGATTCTGCAGAAGGTAAATCATGCGAATCTGGTGAAATTAAGGGGCGTCTCATCAGACAACAATGCTGGAAATTGCTTCTTGGTTTATGAATATGCTGAAAATGGATCTCTTGATAAATGGCTGTACTCCATGTCTGCTTCAGAAGCTTCTTCTGGTTTTGTGCCATTTCTCACATGGAGTCAAAGGATCTGCATTGCACTAGACGTGGCCATGGGTTTGCAATACCTGCATGAACACACTCAACCAAGAATAGTCCACAGGGACATCAGAACAAGTAACATACTTCTCGACTCGAGTTTCAAGGCGAAGATAGCGAACTTCTCGATGGCTAGAACTTCTATGAACCCAATGATGCTGAAAGCAGATGTTTTTGCTTTCGGGGTTGTTTTGCTGGATTTGCTCACAGGGAAGGAAAGCATGACTACGAATGAAAAAGGCGAGGTAGTGATGATGTGGAAGGATATCAGAGAAATCTTTGATGCAGAGGAAGAGAAGAAGAAAGAGGATAGACTCAGAAAATGGATGGATCCTAGGCTGGGAAGCTTATATCCCATTGATCATGCTGTGAGCTTGGCCTCCATGGCAGTGACTTGCACTGCAGAGAAGCCTTTGTCCAGACCAACCATGGCAGAAGTTGTTCTTAGCCTCTCGTTTCTGAGTCATTCAGGTCATAATGTCACAGTGGAACTATGGACTTCCGGTGGTGGATTAGATGCAGAAGTTCCTCAAATGATAAGTCCTATCACAGCTCGTTGA 2274 0.4257 MVRQSGLEPGAYLCKVIIQGYCKSERAALAWRIFEDMKNSGLMPDSDVKELLVKSLWKEGRRREAAAVEEGCEQINEVLPLALRGHEWSVSSARNPKTEESLVDMWTFVFRVGIHLSDCFGKEIGSCKRKVEQQSSLHLTLFSAEASVSNPDLLTMAVFFLPSHTIFLALIFFSTPLIAAQSRTENGTDFSCPSDSPPSCETYVSYYAQSPNYLSLVNISDVFGISPLSIARASNLSDEDNKLVPGQLLLVPLTCGCTGNSYFANITYEIKLGDSYRFLSYTAFENLTNYPVVKEFNPGRNPHLLMGGTKIVFPLFCRCPSRSHLAKGIKFLITYVWQPSDNVNVVSTKFNASEMDIMTENKYQNFTSAANLPVLIPVLQLPDVSRLYLSPKRKGNNHRLSVIIGIILGCTLLTVLIMLLVYVYCLRKKKISLKKSASFLETADKLLSGVSGYVSKPTMYEFSVIMEATMNLNEQCRIGGSVYKAKIDGQVLAVKKVREDFMEELKILQKVNHANLVKLRGVSSDNNAGNCFLVYEYAENGSLDKWLYSMSASEASSGFVPFLTWSQRICIALDVAMGLQYLHEHTQPRIVHRDIRTSNILLDSSFKAKIANFSMARTSMNPMMLKADVFAFGVVLLDLLTGKESMTTNEKGEVVMMWKDIREIFDAEEEKKKEDRLRKWMDPRLGSLYPIDHAVSLASMAVTCTAEKPLSRPTMAEVVLSLSFLSHSGHNVTVELWTSGGGLDAEVPQMISPITAR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0949 757 Gene3D Transferase(Phosphotransferase) domain 1 622 732 - -
Lele47g0949 757 SUPERFAMILY Protein kinase-like (PK-like) 472 725 IPR011009 -
Lele47g0949 757 Gene3D Phosphorylase Kinase; domain 1 448 537 - -
Lele47g0949 757 SMART tyrkin_6 472 722 IPR020635 GO:0004713|GO:0006468
Lele47g0949 757 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 10 44 IPR002885 -
Lele47g0949 757 Gene3D Transferase(Phosphotransferase) domain 1 538 621 - -
Lele47g0949 757 ProSiteProfiles LysM domain profile. 205 251 IPR018392 -
Lele47g0949 757 Pfam Protein tyrosine and serine/threonine kinase 495 620 IPR001245 GO:0004672|GO:0006468
Lele47g0949 757 ProSiteProfiles Protein kinase domain profile. 440 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0949 757 TIGRFAM PPR: pentatricopeptide repeat domain 14 45 IPR002885 -
Lele47g0949 757 Gene3D Tetratricopeptide repeat domain 1 77 IPR011990 GO:0005515
Lele47g0949 757 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 167 730 - -
Lele47g0949 757 ProSitePatterns Tyrosine protein kinases specific active-site signature. 590 602 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0949 Lele-ChrLele47 15548995 15553198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0949 190 731 Receptor kinase-like Gene Family AT3G21630 30.948 7.49e-71 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele47g0949 PK_Tyr_Ser-Thr 1e-23 CL0016