Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0943 ATGTATAACAAATGGCAAGCGCAAAAATGGTGGGCAGAGAACTACGAAAGGGTCATGGAACTTTACAACGTTCAGAAGCTTAATCGCCAAGCCTCCCCTCTTCCAACACCACCAAGATCTGAAGATGAGATCTCAAAGCTTGAACCAACAGAAGATATCCCAGTGACACCTCCACTAACCAAAGAACGATTACCTCGCAATCTAATTCGACCAACAGGGATGGGAACGGGATACTCATCATCGGATTCTTTTGACCATCGTTCAATGCAGTCCCGCCACCATCATGACTCGGGTGGCCTCAACTCAACCCCTAAAGTCTCCACGATAAGCCCGGCCAAGACAGAAGCATCATCCATGGACGCCTCTATCAGAAGCAGCTCATCCAGAGAGGCTGATCCTTCAGGGGATATATCAATCAGCAATGCCAGTGATCAAGACACTGAATGGGTCGAACAGGATGAACCTGGTGTTTATCTTACTATCAGAGCATTGCCAGGTGGTAAAAGGGAGCTAAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAATCGAGCGAGGATACATGAACAATACTTGTGA 609 0.4713 MYNKWQAQKWWAENYERVMELYNVQKLNRQASPLPTPPRSEDEISKLEPTEDIPVTPPLTKERLPRNLIRPTGMGTGYSSSDSFDHRSMQSRHHHDSGGLNSTPKVSTISPAKTEASSMDASIRSSSSREADPSGDISISNASDQDTEWVEQDEPGVYLTIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0943 202 ProSiteProfiles BRX domain profile. 147 202 IPR013591 -
Lele47g0943 202 MobiDBLite consensus disorder prediction 95 146 - -
Lele47g0943 202 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Lele47g0943 202 MobiDBLite consensus disorder prediction 28 151 - -
Lele47g0943 202 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 202 IPR044532 -
Lele47g0943 202 Pfam Transcription factor regulating root and shoot growth via Pin3 147 201 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0943 Lele-ChrLele47 15511051 15512389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0943 1 202 Major Intrinsic Protein MIP AT1G31880 46.040 7.42e-50 163