Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0904 ATGATCCTCGGTGAGAGTAGCGGCGATGACCACGAGGTTGAAATTAAGGCACCAAAGAAGCGAGCTGAGACTAGGGTACAAAACGAGACGCGAAATCTCATTGCTTTTCGCCGTGAGATGCATGGGCTGTTCAATACCTCCAAATCTAATAAGCACCTGTGGGATCAGATATCGGCGAAGATGAGAGACAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGAGAAGTCTCAATATAGGGGAGCTGGGTCCGCTAAGATGTCGTATTACAAAGACATTGAGGAGATCTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAGCCCTACTCCTCCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTTCAGCCACTGGCAGATCAACACTCAATCTTGAAAACCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAAATGATACAGTTGGCACAAGTGGAGTTCCTTCTTGGAGTTGGAGAGAAACTCCTATAAGCGGTGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGCGACTACAGAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGTAATAAGAGCTGATTTTAGGTTGAGAACCGAACGCTTGTTTTGGTTGGAGGATGAATGCCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTAG 795 0.444 MILGESSGDDHEVEIKAPKKRAETRVQNETRNLIAFRREMHGLFNTSKSNKHLWDQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKEKSQYRGAGSAKMSYYKDIEEILKERSKSVCYKSPTPPKVESYMQFSDKGSATGRSTLNLENRLDHDEHPLAITANDTVGTSGVPSWSWRETPISGGEGQSCCGRVITVKWGDYRRRIGIDGTSEAIKEVIRADFRLRTERLFWLEDECQIIRSLDRDMPLGNYTLHLDEGMAIKVCL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0904 264 MobiDBLite consensus disorder prediction 1 24 - -
Lele47g0904 264 CDD GT1 27 88 - -
Lele47g0904 264 Pfam Myb/SANT-like DNA-binding domain 28 108 IPR044822 -
Lele47g0904 264 FunFam trihelix transcription factor GT-1 25 87 - -
Lele47g0904 264 MobiDBLite consensus disorder prediction 7 24 - -
Lele47g0904 264 Gene3D - 26 86 - -
Lele47g0904 264 ProSiteProfiles Myb-like domain profile. 17 81 IPR001005 -
Lele47g0904 264 Coils Coil 19 39 - -
Lele47g0904 264 PANTHER FI21293P1 8 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0904 Lele-ChrLele47 15232896 15236557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0904 1 263 Trihelix Transcription Factor Family AT3G25990 64.789 1.99e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele47g0904 Myb_DNA-bind_4 4.6e-18 CL0123