Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0894 ATGATGACCATGGAGGGAATGATGGACAAGGGCGTCCTCGACGACGTTATTCAGAGGCTGCTCGAAGGTGATATACATGGACAGTACCAAGACTTACTGAGGCTATTTGAATATGGCGGCTACCCTCCCGATGTGGACTACTTGTTTCTGGGGGACTATGTTGACAGAGGGAAGCAAAGCTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCCGACAAAATTCATCTCCTGAGAGGGAACCATGAAGAAGCTAAGATAAACCGGGTATATGGGTTCTATGATGAATGTAAAAGGAGGTTCAATGTTCGGTTGTGGAAGTTATTTACTGACTGCTTTAACTGTCTGCCCGTAGCTGCACTCATTGATCGGAAAATACTTTGTATGCACGGCGGTCTCTCTCCAGAATTGCAAAATTTGGATCAGATAAAAGAGATTACAAGACCTACCGAAGTTCCTGATGGTGGTCTCCTCTGTGATCTTTTATGGTCTGATCCTGATCCCACCATCGAGGGCTGGGCAGGAAGCGACCGGGGGGTATCCTGTACTTTTGGGCCTGATGCAGTCAGAGACTTCATGGATAAGAACGATCTTGACCTCATTTGCAGAGGTCATCAGGTGGTGGAGGATGGATATGAGTTTTTTGCTAATAAAAGTTTAGTCACACTATTTTCTGCCCCAAACTACGGTGGGGAGTTTGATAATGCTGGTGCGTTGTTGAGCGTTGATCAGTCTCTAATATGTTCCTTCGAGATACTGAAACCCATCATGGATAAAGCGTCAGGAAAAATGAATCTCAGGAAGGCATGTATATCATAA 828 0.4469 MMTMEGMMDKGVLDDVIQRLLEGDIHGQYQDLLRLFEYGGYPPDVDYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEEAKINRVYGFYDECKRRFNVRLWKLFTDCFNCLPVAALIDRKILCMHGGLSPELQNLDQIKEITRPTEVPDGGLLCDLLWSDPDPTIEGWAGSDRGVSCTFGPDAVRDFMDKNDLDLICRGHQVVEDGYEFFANKSLVTLFSAPNYGGEFDNAGALLSVDQSLICSFEILKPIMDKASGKMNLRKACIS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0894 275 FunFam Serine/threonine-protein phosphatase 17 268 - -
Lele47g0894 275 Pfam Calcineurin-like phosphoesterase 23 210 IPR004843 GO:0016787
Lele47g0894 275 ProSitePatterns Serine/threonine specific protein phosphatases signature. 81 86 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 47 74 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 200 220 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 18 45 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 80 104 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 143 170 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 114 140 IPR006186 GO:0016787
Lele47g0894 275 PRINTS Serine/threonine phosphatase family signature 222 238 IPR006186 GO:0016787
Lele47g0894 275 SUPERFAMILY Metallo-dependent phosphatases 23 259 IPR029052 -
Lele47g0894 275 Gene3D - 18 268 IPR029052 -
Lele47g0894 275 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 23 264 - -
Lele47g0894 275 SMART pp2a_7 4 260 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0894 Lele-ChrLele47 15160265 15161998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0894 13 206 Calmodulin-binding Proteins AT5G63870 33.624 1.93e-31 116