Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0873 ATGGTAAAAGAAATCTTAGATCAACTGAAAACCAAGGCACTCCTCATGGCTCCATCTAGAAAATCCAAAAGTGTCACTAAGAGATTTTCAAATACTCGTGAAGCTGTATCTAATGAAGATAAAAATACAGAGAATGTTAGCAAGGCTAGGCCACAGGGTAGTCCTGGAATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGACCACAATGGAGTAAGGAGGAGCTAGAGCGTTTCTATGAAGCTTACCGTAAATATGGGAAAGACTGGAAGCAGGTGGCTGCTGCAGTGCATAATAGATCTTTGGAAATGGTGGAAGCTTTGTACTCTATGAATCGAGCGTACCTGTCTCTTCCAGAGGGCACTGCTTCTGTGGTTGGACTCATAGCCATGATGACAGATCACTATAGTGTACTGGGAGGAAGTGATAGTGGACAAGCAATCAACGAAGATAAAGAAACATTTAGAAAGCCTCCAAAATTTTTGCGGCAGAAATGTTCAGATGGCAACTATAAAGCGTTAGATGGACATTCTTCCGTTCATTCTCAGTCTCGTTCAGTTACATCAGATGATGGTTGCCTGTCATTGTTGAAGAAGAGGCATTCTGGATTAAGTTCTCATGCTGTTCGCAAAAGAACTCCTCGTGTCCCTGTTTCACATTCCATTGGTAAGGATATTGGTGAAAAGCATTTTTCACCTGCTAGGCAAGGTTACAGGCAAATAGTTGGCAGCAATGATGTTGCTCATAAGATTGCATTAGCACTGACAGAGGCTTCACAAATAGGTGGCTCTTCCAAAGTTTCTGGCTCACCAAACAATAAATCTAAGGGCATTATGTTATCACCTGGTCAGAATAATGGGAGGAAGAACACTAAATCCGAAGCATTAGGATCCAAATTTTGCCATTCTGACTTGAATGAGGGTAGCTCTGAATTGAGTTTAGGAAGCACAGGGTGCGGTAATGGAGATTATTCTCAAAAACTGAGTCAACGGAGCAGCAGAGAGAATGTTAGAAGAGGAAAAAATGAAGAAAAGGGAACAAAATACTACAGAAAAAAGGTAGAACTCAAAGAAAATGTGAACAAGCATTTGGATGGTGTAAAGGAAGCTTCCAGTGGGACAGACGAAGATAAAGGACTGGATTTAGTCAAGTATAAAATTGACACTAATTTTGCATGCACAAAAGGTGCTAGGTCCTCTTTCAAGAGTTTCAGGAAGGGAAGTAAAAAAGTACTGCTTGAAAAAAAAGATGAAGGTTCTTCTTTCGATGCTCTGAAAGCCTTGGCTGATCTATCTTTGATGATGCCAGTCTCAAACCCTGAAACCGAGTCGCCTGTTCGGGTGGTGGAAGAAAACCAAGGAGTTGTTGATGAGTCTAAAGTGGAAACCGATCATGCTATTCTGAGTGATGAAAGCACTGCTTTAAGTAAATTGGGTTTGGTTTCTCCCGATAATGGAGTTTCTATTCCTCAAGAAGAGAGCACCTTCCACCTTGATTGTAGAAAGAGGAAAATAAGACAAACATCTCCAATATTGAAAAATGATGAAACTCATACCAGTTCTCATTTAAGTGGTTCACAGAAGATCAAGGCTACTGATGACGTGACAAAGTCTGTTATTAAGGGTAAACACTCTTCTATTTCTACACAACAGTCAAGACAACTAAAGGTGGTACAACCCCCAGGAATGATGTCTTCAAGTAATGATGTCAAAGGAGGAAGGGATGATTCACTACTATTGCCCGTAAAAGTTTCATCTACAGATAAAGTTGGTCTAGCAAACAAAGGAAGGCATAGACGGAAGATGGAAATACCAAAACCAATGGTACAACGAGATATAAAGGTGTCAGAAAATATTTTTATTGGTCAACATAGAAAATCTATTCTTCAGAACAGTGTATCAAGCCACAAGGAAAAGCTTATTCATTGCCTGTCTTCACATCAAATACGGAGATGGTGCAGTTTTGAGTGGTTTTACAGTGCTATAGATTACCCATGGTTTGCAAAAAGGGAGTTCATGGAGTACTTGGACCATGTTGGATTGGGGCATGTTCCTAGACTGAGTCGTATTGAGTGGGGAGTTATTAGGAGTTCTCTTGGCAGACCCCGGAGATTTTCTAAGCAATTTTTGATAGAAGAAAAAACAAAGTTAAATCAATACCGGGACTCAGTTAGAGCTCATTATGCAGAACTTCTTGCTGGTACCAGGGATGGCCTTCCAACTGATTTGGCCAGGCCTTTAATTGTTGGACAGCGTGTCATTGCTATTAACCCAAAGACAAGAGAGATTCATGATGGGAGTATACTAACTGTTGACAACTGTAGGTGTCAGGTTCAGTTTGACCAGCCTGAATTGGGGGTTGAATCAGTCATGGATATTGACTGCATGCCTCTGAATCCTTATGAAAATATGCCAGCATCTCTGATAAGGCGCAATGTGATTCCTGCCAAACTAAATGGCAACCTTATTGAGTTCAAGCGTAAACTGAAACAAGGAAAGATTGAGGAGCACAGAATATTGTCCCCCTGCGGGAACTTAGATCATGTTGATGCTCTTTATATACCCCCCTCAGCTCATGGCAGCAACAATTTATTGAAACAGGGAATTTCTTCAAGTTCCAAATTGCCAGCTAATATTGCTTGCAATGAGATTGGTAATGCTCTACTGTCAGCAAATTCTAAAACTTTTTTTCATGAAAATTTCCCATCCAAAGAAGCTGGCGCAAATGCTGTTTTTGAGCTGGTTCGTGCTCTTGACAAAAAGGAAATTGTGCTGTCAGAACTGAAGCAAATGAATGATGAGGCATGTGAAAGACAGAAATATGGGGACAACTCTTTAAACGATTCAGAGCCATTTAAGAGGCATTATGCTGCGGTACTGTTGCAGTTAAATGAAGTGAACGAGCAGGCCTCTTCTGCCTTGTTTTGCATGAGACAGCATAACACATACCAGGGGAACTCCTCTAATTTATCGCCAAGGCCCACTGCTAATTCGGATGATCTTGGTGGCCAATCTAGCTCTTCGTATTGTTCAGCTTCTCGCAACCAAAATTGTCAATCTCATATAGCTGAAATGATTGAAAGTTCTAAAAGAAGAGCCCGTACAATGGTTGATTCAGCTATGCAGGCTATGTCATCTTTTACTAAGACAGAGAGTAAGGTTGAAGGGATTGAGGAGGCAATTAATTTTATAAATAATCGGCTTTCAGCGGATGACCATGCTGCTCCATCCTCGCAATTCATGCCTACAGATTCTGTTCATGTCACTGTAGCTTCTCAGGATCAGATGACTGCAAGTAAATCTAATCCTTTGCCGAATAATCATTCACAAGATCCTGAACTAAACATCTCATCTGATCAAAATGAAGTGAAAATTCCCTCAGAACTTATTTCTCAATGTCTAGCTACATTGCTGATGATCCAGAAATGCACAGAACGGCATTTGCCACCTGCCGAGGTTCTTCGTGTGCTAGATTCTGCAGTGACAAATTTGCAGCCATATTGTTCAAGGAATCTTCCAATATATGGAGAGATACAGAAATGCATGGGAATAATCAGGAATCAGATATTGGCACTCATACCTACCCAAACTACCTAA 3597 0.4076 MVKEILDQLKTKALLMAPSRKSKSVTKRFSNTREAVSNEDKNTENVSKARPQGSPGIQKKRKLADMLGPQWSKEELERFYEAYRKYGKDWKQVAAAVHNRSLEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGQAINEDKETFRKPPKFLRQKCSDGNYKALDGHSSVHSQSRSVTSDDGCLSLLKKRHSGLSSHAVRKRTPRVPVSHSIGKDIGEKHFSPARQGYRQIVGSNDVAHKIALALTEASQIGGSSKVSGSPNNKSKGIMLSPGQNNGRKNTKSEALGSKFCHSDLNEGSSELSLGSTGCGNGDYSQKLSQRSSRENVRRGKNEEKGTKYYRKKVELKENVNKHLDGVKEASSGTDEDKGLDLVKYKIDTNFACTKGARSSFKSFRKGSKKVLLEKKDEGSSFDALKALADLSLMMPVSNPETESPVRVVEENQGVVDESKVETDHAILSDESTALSKLGLVSPDNGVSIPQEESTFHLDCRKRKIRQTSPILKNDETHTSSHLSGSQKIKATDDVTKSVIKGKHSSISTQQSRQLKVVQPPGMMSSSNDVKGGRDDSLLLPVKVSSTDKVGLANKGRHRRKMEIPKPMVQRDIKVSENIFIGQHRKSILQNSVSSHKEKLIHCLSSHQIRRWCSFEWFYSAIDYPWFAKREFMEYLDHVGLGHVPRLSRIEWGVIRSSLGRPRRFSKQFLIEEKTKLNQYRDSVRAHYAELLAGTRDGLPTDLARPLIVGQRVIAINPKTREIHDGSILTVDNCRCQVQFDQPELGVESVMDIDCMPLNPYENMPASLIRRNVIPAKLNGNLIEFKRKLKQGKIEEHRILSPCGNLDHVDALYIPPSAHGSNNLLKQGISSSSKLPANIACNEIGNALLSANSKTFFHENFPSKEAGANAVFELVRALDKKEIVLSELKQMNDEACERQKYGDNSLNDSEPFKRHYAAVLLQLNEVNEQASSALFCMRQHNTYQGNSSNLSPRPTANSDDLGGQSSSSYCSASRNQNCQSHIAEMIESSKRRARTMVDSAMQAMSSFTKTESKVEGIEEAINFINNRLSADDHAAPSSQFMPTDSVHVTVASQDQMTASKSNPLPNNHSQDPELNISSDQNEVKIPSELISQCLATLLMIQKCTERHLPPAEVLRVLDSAVTNLQPYCSRNLPIYGEIQKCMGIIRNQILALIPTQTT 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0873 1198 MobiDBLite consensus disorder prediction 984 1012 - -
Lele47g0873 1198 Gene3D - 4 123 - -
Lele47g0873 1198 Coils Coil 914 938 - -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 19 62 - -
Lele47g0873 1198 PANTHER LIN-9 16 1197 IPR010561 GO:0006351|GO:0017053
Lele47g0873 1198 MobiDBLite consensus disorder prediction 332 347 - -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 323 347 - -
Lele47g0873 1198 SUPERFAMILY Homeodomain-like 67 113 IPR009057 -
Lele47g0873 1198 Pfam DIRP 657 756 IPR033471 -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 261 293 - -
Lele47g0873 1198 Pfam Myb-like DNA-binding domain 70 105 IPR001005 -
Lele47g0873 1198 ProSiteProfiles Myb-like domain profile. 71 101 IPR001005 -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 541 572 - -
Lele47g0873 1198 ProSiteProfiles SANT domain profile. 66 103 IPR017884 -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 507 572 - -
Lele47g0873 1198 CDD SANT 71 105 IPR001005 -
Lele47g0873 1198 SMART sant 67 115 IPR001005 -
Lele47g0873 1198 SMART DIRP_2 658 759 IPR033471 -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 512 533 - -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 204 229 - -
Lele47g0873 1198 MobiDBLite consensus disorder prediction 1095 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0873 Lele-ChrLele47 14982939 14998894 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele47g0873 DIRP 4e-28 No_clan