Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0870 ATGTCCATGTCCACCTCTAGAACCCTAGATTCTTCTTCTTCTTCTTCTTCCTCATCATCATTCAAAGGCTATGAAGCAAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACATCTCCTTGTGGTGGTGAGAAAAGAGGGAGAAGAAAGCAATCAGAACCAGGAAGGTTCCTTGGTGTCAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATAAGGGACCCCACAACAAAAGAAAGGCATTGGCTTGGAACTTTTGACACTGCTCAAGAAGCTGCTCTGGCTTATGACAGAGCTGCTCTCTCCATGAAAGGAAGCCAAGCAAGAACAAATTTCATATACTCTGACACTGACTCTACTTTTCACTCTCTTCTTTCTCCTTCTTTAGATGTTCATCAACCACTTTTACCAACTTATCATCAGAATAGTGCTAGTTCAGTAGTTTCTGATATGTCTCATCTTCATCAGATTGAGCCTAATAATAATAATAATCTGATGAACAATGGCATGCCTGAAACTGAGAACTTTTTCTTGTTTTCCAGTGATTATTCTTCTTCTAACTCAGGATACTTGGAATGTGTGGTTCCTGATAACTGTCTGAGAAGTTCAAGTGATCACCAAAAGGGTCAATCTCAACAACAACAACAACAACAAGGAATGATCAAGATGCCAACAGTGGGATGTGAAAGTTCAGATTTTTATTCATACCCAGATGAAATCTCTCAGGGATTTTCATGGGATTCTGATTGCAGTGAGCTTTCTGCTATATTCGACAGAAACCCAATGATGAGGGTTGAAGAAGATGATGGTGGGCGCTTCTTTGGGAGCTCTTCAAGCTATGGCGGGCTCATGATGACTGATCAATATGCTTCTGTTTCTGCTTCAGCTTCTTCTTCTTCTTCATATGCCTTTGGAGATATTGATAAGGGATCCTCAATGTTCTGA 951 0.4101 MSMSTSRTLDSSSSSSSSSSFKGYEANQTQMVLSLLQRNTSPCGGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDTDSTFHSLLSPSLDVHQPLLPTYHQNSASSVVSDMSHLHQIEPNNNNNLMNNGMPETENFFLFSSDYSSSNSGYLECVVPDNCLRSSSDHQKGQSQQQQQQQGMIKMPTVGCESSDFYSYPDEISQGFSWDSDCSELSAIFDRNPMMRVEEDDGGRFFGSSSSYGGLMMTDQYASVSASASSSSSYAFGDIDKGSSMF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0870 316 CDD AP2 58 114 IPR001471 GO:0003700|GO:0006355
Lele47g0870 316 FunFam Ethylene-responsive transcription factor 2 58 116 - -
Lele47g0870 316 MobiDBLite consensus disorder prediction 44 58 - -
Lele47g0870 316 MobiDBLite consensus disorder prediction 1 23 - -
Lele47g0870 316 Pfam AP2 domain 61 107 IPR001471 GO:0003700|GO:0006355
Lele47g0870 316 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Lele47g0870 316 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Lele47g0870 316 MobiDBLite consensus disorder prediction 204 223 - -
Lele47g0870 316 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Lele47g0870 316 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 31 231 - -
Lele47g0870 316 SUPERFAMILY DNA-binding domain 59 116 IPR016177 GO:0003677
Lele47g0870 316 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Lele47g0870 316 MobiDBLite consensus disorder prediction 39 58 - -
Lele47g0870 316 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0870 Lele-ChrLele47 14959319 14960269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0870 3 316 AP2-EREBP Transcription Factor Family AT5G18560 38.462 3.95e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele47g0870 AP2 1.3e-12 CL0081