Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0869 ATGTTCTTCGTGAAGGGTTTTACAAGAACCCTATCAATTCGGTCACCCTATAATCTTTTTCAACATTTTTCATCACCATCAACCTTCGCTCCCATGTACAGCACAGCCGCATCTACCTCGACTTCAGAGAAAATGTCTTTCACAGTCAACTACCTCATTAACAAATGTGGATTCTCCCGAGCAACCGCATCGGAGATTTCCCAGCGCGTCTCTCTCAAGTCATCGGAAAAACCAGACTTCGTTCTCACCCTTTTCAGAAGCTGTGGTTTTACCAACTCGCAGATTCGCAATGTCATCAAGAAAGCACCGAAATTGCTTCTGAGTAATCCTGGTGAAACCATTTGGCCTAAGCTTGATTTCTTACTATCCAAAGGTGCGTCTTGCTCTCAACTTGTGAACATTGTGACCAGAAGCCCTCGATTCTTATTGAGAAGCTTAGAAAATCATCTAATACCTAGTTATAATTTTGTTAAAGGCTTTGTTGGGTCTGATCAAAGGACTATCACCTCAATCATGCGTAGTAATAGAATAATTTGCTGTGATTTCCTGGAAACTAACATTCAACTCTTGCTTGACATTGGAGTGCCCAAATCTGGCATTGCTGGATTGCTTCATGCGTGGCCTAGTTTGTTTACTATGAACTTAGATAAATTTAAAGTGGCAGTTGAAGGATTAAAGGATAGAGGTTTTGACCCTTCAAAATCAAAATTCATTCCTGCATTGTATGCCACAAATAAGTTAAGCAAATCCATTTGGAATAGTAAGGTTGAATTTTTTAAGAAGTGGGGCTGGTCTGAAGAAGAGATTGATAGAGCATTTGTACTGCATCCTCATTGTATGTTAAAATCTCTATCTAAGATTAAGGCAGTGATGGAGTTTTTTGTGAATGACATGGGTTGGGACTCCAGTTTGCTTGCTAGTAATCCCATAATTTTTTCAATGAGTTTGGAGAAAAGACTCATTCCAAGGGCTTATGTCGTGCAATATATTCATTCAAGAGGTTTAATTAGGAATGCCTGTATCGTATACCCTTATTATATTACTGAAAAGATATTCCTTGAGAAATATGTCATTCGTTTTGAGGATGAAGCTCCTCGATTATTGAAGTTGTATCAAGAGACAATGAATCGTTCAAGAAAAACTTGGATCTGA 1152 0.3863 MFFVKGFTRTLSIRSPYNLFQHFSSPSTFAPMYSTAASTSTSEKMSFTVNYLINKCGFSRATASEISQRVSLKSSEKPDFVLTLFRSCGFTNSQIRNVIKKAPKLLLSNPGETIWPKLDFLLSKGASCSQLVNIVTRSPRFLLRSLENHLIPSYNFVKGFVGSDQRTITSIMRSNRIICCDFLETNIQLLLDIGVPKSGIAGLLHAWPSLFTMNLDKFKVAVEGLKDRGFDPSKSKFIPALYATNKLSKSIWNSKVEFFKKWGWSEEEIDRAFVLHPHCMLKSLSKIKAVMEFFVNDMGWDSSLLASNPIIFSMSLEKRLIPRAYVVQYIHSRGLIRNACIVYPYYITEKIFLEKYVIRFEDEAPRLLKLYQETMNRSRKTWI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0869 383 PANTHER CGI-12 PROTEIN-RELATED 45 359 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 Gene3D Transcription termination factor 3, mitochondrial 162 364 IPR038538 -
Lele47g0869 383 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 SMART mt_12 168 196 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 FunFam Mitochondrial transcription termination factor-like 146 364 - -
Lele47g0869 383 Pfam mTERF 82 231 IPR003690 GO:0003690|GO:0006355
Lele47g0869 383 Pfam mTERF 184 338 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0869 Lele-ChrLele47 14944895 14946046 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele47g0869 mTERF 7.7e-20 No_clan