Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0864 ATGGGTGGGTGTTTTCCTTGCTTTGAATCATCAAACAAGGACCAAGGGTTGAAGGAAGTTGCAGTCAAGGATTCCTTTAAAGAAAGTTCAATTGTTTCCAAGTCTAACCACGCCAATAGGGTTAGCTCAGATAAATCAAAATTGAAAAGTGGCTCTGATTCTAAGAAGGAACCACCCGTTCCCAAGGAACCAACAGCCCATATTGCTGCGCAAACATTCACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGCTTATTAGGTGAAGGAGGTTTCGGGCGTGTCTACAAAGGTCGTCTTGAGAGCACGGGACAAGTAGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAGGTTCTCATGCTTAGTCTCTTGCATCATCCCAATCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGACCAGAGGCTTCTTGTTTATGAATTTATGCCATTGGGCTCCTTAGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTAGACTGGAACACAAGAATGAAAATTGCCGCTGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTGAAGTCATCCAACATCCTCCTGAATGAGGGCTATCGTCCCAAGCTATCAGATTTTGGGCTTGCAAAGCTCGGTCCTGTTGGTGACAAGACTCATGTATCTACACGAGTAATGGGAACATACGGCTACTGTGCTCCAGAGTATGCCATGACAGGCCAACTCACTCTGAAGTCTGATGTATATAGCTTTGGTGTCGTCTTTCTTGAACTTATTACCGGGCGCAAAGCTATTGACAATACCCGTGCACCTGGAGAGCATAATCTTGTTGCCTGGGCACGGCCCCTTTTTAAAGACCGTAGGAAGTTTCCAAAAATGGCCGATCCCCTACTTCAAGGGTGTTACCCCATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACTTGGCCTCACAGACATATGACCCAAATGCAACCAATCAGAATAGTAGAGTTGGTTCATCAACCCCGAGGAGCAGGGATGGCCGGAGGAGCATGACAGATGGCATTATGGATAGCCCGGATCATGGGCGGAGTGGCTCTCCTTCCACTTATAAGAACTCACTCAATGTCCAGAGAAGAGATAGTAGGGATCCAAGTGTTGGGAAAGATTTAGGCAGGAGTGAAACTGGGTCAGGAAGATGGGGATTGGATGATGTAGAAAGGCTGGAATCTCAGAGAGACAGCCCTGTAAATACTGGGAGAGCTAGGGAAACTCCAAGGAACCATGACCTAGACAGAGAACGCGCTGTCGCGGAAGCGAAAGTATGGGGCGAGAATTGGAGAGAAAAAAAGAGGGCTAATGCAGTGGGTAGCTTTGATGCTACAAATGAGTAG 1515 0.466 MGGCFPCFESSNKDQGLKEVAVKDSFKESSIVSKSNHANRVSSDKSKLKSGSDSKKEPPVPKEPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLNEGYRPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGCYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNATNQNSRVGSSTPRSRDGRRSMTDGIMDSPDHGRSGSPSTYKNSLNVQRRDSRDPSVGKDLGRSETGSGRWGLDDVERLESQRDSPVNTGRARETPRNHDLDRERAVAEAKVWGENWREKKRANAVGSFDATNE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0864 504 Gene3D Transferase(Phosphotransferase) domain 1 162 382 - -
Lele47g0864 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lele47g0864 504 MobiDBLite consensus disorder prediction 368 474 - -
Lele47g0864 504 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0864 504 MobiDBLite consensus disorder prediction 383 397 - -
Lele47g0864 504 MobiDBLite consensus disorder prediction 440 454 - -
Lele47g0864 504 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Lele47g0864 504 Pfam Protein kinase domain 90 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0864 504 PANTHER OS07G0668900 PROTEIN 4 373 - -
Lele47g0864 504 MobiDBLite consensus disorder prediction 40 62 - -
Lele47g0864 504 SMART serkin_6 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0864 504 FunFam Serine/threonine-protein kinase PBS1 162 377 - -
Lele47g0864 504 SUPERFAMILY Protein kinase-like (PK-like) 61 359 IPR011009 -
Lele47g0864 504 Gene3D Phosphorylase Kinase; domain 1 59 161 - -
Lele47g0864 504 FunFam Serine/threonine-protein kinase PBS1 60 161 - -
Lele47g0864 504 MobiDBLite consensus disorder prediction 30 66 - -
Lele47g0864 504 CDD STKc_IRAK 91 360 - -
Lele47g0864 504 MobiDBLite consensus disorder prediction 368 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0864 Lele-ChrLele47 14902360 14906495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0864 4 364 Glycoside Hydrolase AT3G07070 65.928 4.69e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele47g0864 Pkinase 4.9e-45 CL0016