Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0847 ATGGACTGCAATAGAGAAGAGGCCTTAAGGGCCAAGGATGTTGCAGAAAAGAAGATGGAAAACAAAGATTTCACAGGGGCCCGTAAAGTTGCTATAAAGGCTCAGCAACTATTTCCTGATCTGGAGAATGTAGCTCAGATGCTTGTTGTTTGTGATGTTCATTGCTCCGCGGAGAAGAAATTTTTCAATGAAAAGGACTGGTACGGAATTCTTCAAGTAGAGCAGGCAGCTGATGAAGCAACAATAAGGAAGCAATATAGGAAGTTTGCTCTTCTACTTCATCCTGATAAAAACAAGTTTGCTGGCGCTGAAGCTGCATTTAAGCTGATAGGGGAAGCTCAGGCAGTGCTTTTGGACAGACAGAAACGGGCTGCACATGACAGAAACAGAACTTCGTATTGTCCATCCAGTAATGTTTTTGTGAATGTTGATACTGGGCTGCAAAACCATATTAGGACCAATTTCACAAACTTGAATCCTCAGCCGCATCAGTCGAGTCGGCCAGCAGCTCAGCAGGGGTTTAATGATGGCTCCTCTACATTTTGGACTGTTTGCCCATTTTGTTCTATTAGATTCCAATATTACTTAGAAGTTCTAAATAGATCTCTGCGTTGTCAAAGTTGTAACAGGCCCTTTGTTGCATATGACGTGAGTGTGCAAGGTACAGTTCCACCAGCTTATTCTGGTCCACAACCTTTTGTGCAGCCTAAAGATGGTCCTAATCATCACTCGTTTAAGGTGGACGTTGGAACTCAAGGTAAGTCACGTGGTAGAAATGTCAATACAAAACCTTTTGATAAGAAAGTCCACACTTCCCATGTCTCTAGAAAGCTTAATGGAAAACGGCGGAGGGGGCAAGTAGAGGAAATTAGTGAAAGTTCTGATTCCATACACAGCTCTGATTCTGAAAGTGGTATGGCTTCTGATGATATCATTTCTGACGAGGATGGTATTTCTAGCAAACTAAACCATGTCACTTCTGGGGAAGAGAATGCTCGTAGATCTACACGGAAAAAACAGCAGGTTTCCTACAAGGAGAATGCAAGTGATGATGACAATGATGACATAAATGTTTCAAAAAGGGCGAACGGTTTGGCTGATGATCAAGAACATCACGAGAAAGAGTTAAAGCAGAAGCAGAAGCAGAAGCATGGTGTTTACCCTGAAGACATATTACTCGATTCAGTGGAAGGTTCAAAGATGACTGCTGAAGGTAGTGAGCCTGATTCAGCCTGCAACGTAACAGAGCAGCCTAATATTATAGTCTGTCCTGATGCAGAGTTTAATGACTTTGACAAGGACAAGAAGAAAGATTGTTTTGCAGTTGGGCAGGTTTGGGCTGTTTATGATACAAATGATGGCATGCCTAGATTCTATGCTTTAATTAAAAAAGTTTTCTCCTCCGGGTTCAAGCTGCGAATAACATGGTTTGAACCAGAACCAAGTGATGAGGATGAAATTAATTGGGTCAACCAGCAATTGCCAGTGGCTTGTGGAAAGTATGGGCTTAGAAATTCTGAAACCACAGAAGACCATCCCATGTTTTCTCATGGAGTTTTGTATGAAAAAATTGGAAGTAATACTTTTAAAGTTTACCCTAGAAAGGGAGAAACCTGGGCTCTCTACAAAAATTGGGATATCAAATGGTACATGGACGTGGAATCTCATCAGAAGTATGAATTTGAGTTTGTCGAAATTTTGACTGACTATGTTCAAGGTGAGGGTGTATTTATTGCATACTTGGTGAAATTGAGAGGTTTTGTGAGTCTCTTCTCTAGAGTTATGAAGGAAGGCGCCTATGCAATTAAAATTCCATCAGCAGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTCAGGAAAGAGTAGGTGTTCCTATAGGATCTTGGGAACTTGATCCTGCGGCTTTGCCTTCAAATCTCGAAGAGGTTGCTGTTCCCAATGATTTGCAAGTGAAGGCTGGCCATTCCCCATCAGGTGGTGTGAGTAGAAGATCTTCAGATAGATTGAAGCCCAAGATGGCACCTGATGGAGATTTACATGCTTTCCAGGCTAATTGTGAAACAAGCAATTCGGCAAAGAACAATAGTTCAGTTAACCATATTGAAGATTCTAGTGTTCCCTTGTCTTCAACCCCAGAAACTATGGAAATTCCAGATCCTCAGTTCTACAATTTTGACGATGGGAAGACCCCAGAGAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATAGCGATGAAGATGGCCTACCAAGGTACTATGGTGAGATTACGGAAATCAGGAGGGGCCCAGGTCTTGAATTGCATATTATGTGGCTTGCTTCCTGCTGGCTACCAGATCACACTATTAGATGGGAAGACAAAGACATGCTTATCTCTTGTGGCAGGTTTAAAAGTAGAATTGGGAATACAAATGTTTATACTAACACACTCTCCCTTTCACATCAGGTACGCGTTAATTTTGACAGAACTAACAATGAATATTCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGGAAATGGTCACCTACAATCAAATGCTCCGATCTGGTAAACTGGGAGTATGACATAGTGGAAATTATTGAAGAAAATGCCTCTTGGATTGAAGTTTTAGTCATGGAGATTGTCAGCGGATATAATTCAGTTTTCAAGTCGAAAACATTTGAAGGATCAGCCATCACCATGAGAGTACCTCTGGCACAGTTGCTCAGGTTCTCCCACCAAATCCCAGAATTCAAACTTACAGAGAAGCATGGCAAGCTGAAAGGCTTCTGGGAGCTTGATCCAGGAGCTGTACCCGTCCACTTTTGGACTTCCCAGTAG 2844 0.4181 MDCNREEALRAKDVAEKKMENKDFTGARKVAIKAQQLFPDLENVAQMLVVCDVHCSAEKKFFNEKDWYGILQVEQAADEATIRKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQAVLLDRQKRAAHDRNRTSYCPSSNVFVNVDTGLQNHIRTNFTNLNPQPHQSSRPAAQQGFNDGSSTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDVSVQGTVPPAYSGPQPFVQPKDGPNHHSFKVDVGTQGKSRGRNVNTKPFDKKVHTSHVSRKLNGKRRRGQVEEISESSDSIHSSDSESGMASDDIISDEDGISSKLNHVTSGEENARRSTRKKQQVSYKENASDDDNDDINVSKRANGLADDQEHHEKELKQKQKQKHGVYPEDILLDSVEGSKMTAEGSEPDSACNVTEQPNIIVCPDAEFNDFDKDKKKDCFAVGQVWAVYDTNDGMPRFYALIKKVFSSGFKLRITWFEPEPSDEDEINWVNQQLPVACGKYGLRNSETTEDHPMFSHGVLYEKIGSNTFKVYPRKGETWALYKNWDIKWYMDVESHQKYEFEFVEILTDYVQGEGVFIAYLVKLRGFVSLFSRVMKEGAYAIKIPSAELFRFSHRVPSFKMTGQERVGVPIGSWELDPAALPSNLEEVAVPNDLQVKAGHSPSGGVSRRSSDRLKPKMAPDGDLHAFQANCETSNSAKNNSSVNHIEDSSVPLSSTPETMEIPDPQFYNFDDGKTPEKFQVGQIWAFYSDEDGLPRYYGEITEIRRGPGLELHIMWLASCWLPDHTIRWEDKDMLISCGRFKSRIGNTNVYTNTLSLSHQVRVNFDRTNNEYSIFPRKGEVWALYRKWSPTIKCSDLVNWEYDIVEIIEENASWIEVLVMEIVSGYNSVFKSKTFEGSAITMRVPLAQLLRFSHQIPEFKLTEKHGKLKGFWELDPGAVPVHFWTSQ 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0847 947 Pfam DnaJ domain 66 127 IPR001623 -
Lele47g0847 947 Gene3D DnaJ domain 63 181 IPR036869 -
Lele47g0847 947 MobiDBLite consensus disorder prediction 228 389 - -
Lele47g0847 947 MobiDBLite consensus disorder prediction 653 682 - -
Lele47g0847 947 MobiDBLite consensus disorder prediction 364 389 - -
Lele47g0847 947 Pfam Domain of unknown function (DUF3444) 717 924 IPR024593 -
Lele47g0847 947 Pfam Domain of unknown function (DUF3444) 419 625 IPR024593 -
Lele47g0847 947 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele47g0847 947 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele47g0847 947 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele47g0847 947 SMART dnaj_3 65 122 IPR001623 -
Lele47g0847 947 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 693 - -
Lele47g0847 947 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
Lele47g0847 947 MobiDBLite consensus disorder prediction 281 296 - -
Lele47g0847 947 MobiDBLite consensus disorder prediction 327 358 - -
Lele47g0847 947 CDD DnaJ 66 119 IPR001623 -
Lele47g0847 947 Coils Coil 362 382 - -
Lele47g0847 947 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele47g0847 947 MobiDBLite consensus disorder prediction 694 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0847 Lele-ChrLele47 14794070 14796913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0847 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.776 2.91e-31 124