Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0839 ATGGCTCTATCACCTTCGGGCGAAGACACTGTTCCTCCACCAAGGGCATGCAGACCAAGGAATGGGTCTTCTGATTCCATTTCAAGTAATAATGACTCTTTGGATCAACGAATACCTGAGTGTTCTTCTAGGGGTGGTGACATTGAGGAATGCTCAAGCAGTTTAGAACCCAAATCTTCTCCTTCTTCTAAGACCTCTGATTCAGAGGATCAGTCAAATAATCCCCAGTGGCATGGTTTCTTTGGTTTGTTAAAGAAAGGACCCAAAATGCGTTTCCAACCAATTCTTCCAGTTACAAGTGTTCCAAAACTCACCAGAAGAAATAGTAAGAGATATAGGGAGAACCAGGTCCCGCCTCTAAATTCACCATTGAATAATCCAGCTCTCAAGACAATCTTGGACACTGAATTGTTCTGCTTCAAAGCTTCCTGGAAAAGTTTCTCTCATGCAGAGATTGTCACTGCAACTAACAATTTCAGCCATGAGAATGTGATTGGTGAAGGAGGTTATGCTGTGGTTTACAAGGGCAAAATGGAAGATGGGCAATTTGTTGCAATCAAACAGCTCACAAGAGGAACTCTTGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTTCACGTGAATCATCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGGGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTATCATCCATACTTTATGGACCTCGAGAGAAACTTGATTGGAGCTTAAGGTATAAGATTGCTTTTGGGACTGCTGATGGCCTTCGCTATCTGCATGAGGAATGTCAAAGAAGGATAATTCACAGAGATATCAAGGCTTCTAATATTTTGCTCTCAGAGGACTTTCAAGCCATGATATCTGATTTTGGCCTTTCAAAGTGGTTACCAGACCAATGGACCCACCATACAATATCCAAAATTGAAGGCACGTTCGGCTACCTTCCTCCAGAATTCTTCATGTATGGTTTAGTAGACGAAAAGACCGATGTCTATGCTTATGGGGTGCTCTTATTGGAGCTCATTACTGGACGACAAGCTTTAGATGGCTCACAGAAAAGTTTAGTGATGTGGGCAAAACCTTTTCTATCTACAAATAACATTAAAGAGCTTGTCGATCCATGTCTTAATGGCGCTTATGATGAAGAACAAATGAAACTTGTAGTCTTAGTAGCTTCAATGTGTGTTGATCAATCTTCAGCTGAACGACCAAACATGAGCCAGGCGATGAAGATTCTAAGAGGAGAAGAAGATAGCTTGGAGCTCCTGAAATTGCGCTCCAAGTCCAAAATTCAAAGGACACTCTCTGAAGAAGAACTCTTAGATGCAGAGGAGTACATCTCAAGAGAGCTTTTGAATGACAAAGATCGACATATGAAGACTCTTATGGGAAACTGTAACTCTAATGAAGAAGAAAAACAGCAACAACAACATTCACAACTAGAGCAAGGGCTATGA 1491 0.4131 MALSPSGEDTVPPPRACRPRNGSSDSISSNNDSLDQRIPECSSRGGDIEECSSSLEPKSSPSSKTSDSEDQSNNPQWHGFFGLLKKGPKMRFQPILPVTSVPKLTRRNSKRYRENQVPPLNSPLNNPALKTILDTELFCFKASWKSFSHAEIVTATNNFSHENVIGEGGYAVVYKGKMEDGQFVAIKQLTRGTLEEMTADFLSELGIIVHVNHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLDWSLRYKIAFGTADGLRYLHEECQRRIIHRDIKASNILLSEDFQAMISDFGLSKWLPDQWTHHTISKIEGTFGYLPPEFFMYGLVDEKTDVYAYGVLLLELITGRQALDGSQKSLVMWAKPFLSTNNIKELVDPCLNGAYDEEQMKLVVLVASMCVDQSSAERPNMSQAMKILRGEEDSLELLKLRSKSKIQRTLSEEELLDAEEYISRELLNDKDRHMKTLMGNCNSNEEEKQQQQHSQLEQGL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0839 496 SMART serkin_6 159 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0839 496 PANTHER OS08G0249100 PROTEIN 43 465 - -
Lele47g0839 496 MobiDBLite consensus disorder prediction 47 78 - -
Lele47g0839 496 Gene3D Phosphorylase Kinase; domain 1 126 233 - -
Lele47g0839 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Lele47g0839 496 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 236 438 - -
Lele47g0839 496 Gene3D Transferase(Phosphotransferase) domain 1 236 449 - -
Lele47g0839 496 MobiDBLite consensus disorder prediction 21 38 - -
Lele47g0839 496 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 129 233 - -
Lele47g0839 496 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Lele47g0839 496 Pfam Protein tyrosine and serine/threonine kinase 162 422 IPR001245 GO:0004672|GO:0006468
Lele47g0839 496 ProSiteProfiles Protein kinase domain profile. 159 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0839 496 SUPERFAMILY Protein kinase-like (PK-like) 140 424 IPR011009 -
Lele47g0839 496 MobiDBLite consensus disorder prediction 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0839 Lele-ChrLele47 14719635 14723202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0839 146 457 Receptor kinase-like Gene Family AT1G53420 41.562 3.91e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele47g0839 PK_Tyr_Ser-Thr 3.7e-41 CL0016