Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0836 ATGGGCTGTGTCCATTGCAAGTGTTGTCGCGGCTACATTCCGCCCTCGGAATGTGGTGCTAGCACCTGCCGCGGACTCGGCCCTCGCCGTCGCCAAAGGAAACACAAATTTACTCAGAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTATGTTTTAGAATACTTGTTTCTCACACACCAAGGATACTACCCTGATTCACCTGATAAAGAAAGCCAAGATACTTTCTGTATTAGGACACAGGTTCAAGGTAACCCAAACATCCATTTTTTCGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAATTTTGTTAGAGATAGGTTGATCGAAACATTATCAAATGACCCTGCATTGTTGGAGGACCCCGTTAAAGCTTATACTTCAGCATTCTTGGCAACGAATTACAAATTACACAACAGTGAGATTGATGATTCTATGAGCGGCACAACTGCAATTACGGTACTTGTTATTGGAGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCAGTTAACGACGGAAATCGCGTTGTGGAAGGGCTTAAGGATCCTGATGTCCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCAGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTACTCCAGAAGTTTCAGTAGTTCAGCTTACATCTAATAATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTAACATGGTACGGCATGCCAACTTGCTTTCTGTATTAGTTCTTTTAGTGGCAGCGAGCTATACAGATCCCAGTGAAGCATGTACTGCCATTGCTGGGGAGGCATATAAACTATGGTTGGAACATGAAAATCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCTTAACTAATGCTGGTACATCTGTAGTCGGACTAGATAATGTTAATGTTAGTACGGCAATGTGGCTGAAGGTTCCCATTTCGGAATGTAGAAAGCTGAACTGGTCAATGGTCAATTTTCTTCTTCTAATTCAGATCACAGAACTGATCAAAGCCAGTTTCCTGGGATGGCTCTGCCCCTCAGATTTTAGCATTCATAAGGAATCTAAAGACGATTTGCGATAA 1209 0.4285 MGCVHCKCCRGYIPPSECGASTCRGLGPRRRQRKHKFTQSSLKFAPVPSHNYVLEYLFLTHQGYYPDSPDKESQDTFCIRTQVQGNPNIHFFGVYDGHGQFGSQCSNFVRDRLIETLSNDPALLEDPVKAYTSAFLATNYKLHNSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVNDGNRVVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIATPEVSVVQLTSNNLFFIVASDGIFEFLSSQTVVNMVRHANLLSVLVLLVAASYTDPSEACTAIAGEAYKLWLEHENRTDDITIIIVQIKGLTNAGTSVVGLDNVNVSTAMWLKVPISECRKLNWSMVNFLLLIQITELIKASFLGWLCPSDFSIHKESKDDLR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0836 402 SMART PP2C_4 47 325 IPR001932 -
Lele47g0836 402 Gene3D - 48 329 IPR036457 -
Lele47g0836 402 ProSiteProfiles PPM-type phosphatase domain profile. 55 327 IPR001932 -
Lele47g0836 402 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Lele47g0836 402 Pfam Protein phosphatase 2C 75 303 IPR001932 -
Lele47g0836 402 SUPERFAMILY PP2C-like 47 329 IPR036457 -
Lele47g0836 402 CDD PP2Cc 63 327 IPR001932 -
Lele47g0836 402 PANTHER PROTEIN PHOSPHATASE 73 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0836 Lele-ChrLele47 14687869 14691338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0836 1 332 PP2C-type Phosphatase Gene Family AT3G06270 58.516 8.00e-146 416