Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0818 ATGCTGCCTGATCAAAGAAAGAAGTCGTCTGTGGATGTGAACTTCTTCACAGAATATGGCGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGCGTTGTTTGCTCTGCGTTAGATACACACACTGGAGAAAAGGTTGCGATAAAGAAAATTAATGACATATTTGAACATGTCTCTGATGCCACACGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTGCGTCACCCTGATATTGTGGAGATCAAACATATCTTGTTATCACCTTCAAGGAGAGAATTTAAAGATATATATGTCGTGTTTGAACTCATGGAATCCGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACTCCAGAGCACTATCAGTTTTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTACATACATACAGCAAATGTTTTTCACCGAGACCTAAAACCAAAAAACATTTTAGCAAATGTTGACTGCAAACTCAAGATCTGTGACTTCGGTCTTGCCAGAGTAGCGTTTAAAGATACACCCACGGCCATATTTTGGACGGACTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGCTGTGTGGATCCTTTTTCTCCAAGTACACACCAGCTATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTTCATCAGTTGGACCTCATGACTGAACTTCTGGGAACACCATCTTCTGAAGCCATTGCTAGGATACGAAATGAGAAAGCTAGGAGATATTTAAGCAGTATGCGAAAGAAGAAGTCAGTTCCTTTCTCCCATAAGTTTCCTAATGCAGATCCCCTTGCTCTTCGATTGTTGGAAAGAATGCTGGCATTTGACCCTAAGGATCGGCCTACTGCTGAAGAGATCCATATTTTAAAGGTTTGGCCAAGGTGGAAAGAGAGCCTTCAGCACAGCCAGTTAGCAAGATAG 993 0.4139 MLPDQRKKSSVDVNFFTEYGEGSRYRIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLSPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANVDCKLKICDFGLARVAFKDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTELLGTPSSEAIARIRNEKARRYLSSMRKKKSVPFSHKFPNADPLALRLLERMLAFDPKDRPTAEEIHILKVWPRWKESLQHSQLAR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0818 330 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lele47g0818 330 FunFam Mitogen-activated protein kinase 111 319 - -
Lele47g0818 330 SUPERFAMILY Protein kinase-like (PK-like) 22 310 IPR011009 -
Lele47g0818 330 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0818 330 CDD STKc_TDY_MAPK 24 309 - -
Lele47g0818 330 ProSiteProfiles Protein kinase domain profile. 25 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0818 330 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 310 - -
Lele47g0818 330 Gene3D Transferase(Phosphotransferase) domain 1 109 310 - -
Lele47g0818 330 Gene3D Phosphorylase Kinase; domain 1 23 108 - -
Lele47g0818 330 Pfam Protein kinase domain 25 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0818 330 FunFam Mitogen-activated protein kinase 14 119 - -
Lele47g0818 330 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0818 Lele-ChrLele47 14575843 14579143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0818 1 309 MAP Kinase Gene Family AT5G19010 93.204 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele47g0818 Pkinase 5.3e-67 CL0016