Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0817 ATGTTCCTTTCTGTGATTGGAGTTTGTGGCATTTTCATTCGAGATATCAATCTATCATATTTTAAGGCGTTTGAAATGTACTGGTGCTTGGCTTTCTGGTTGTTTTTGGAAAAGAGTCGACCGCACTCGCGCCGTTTCACTGAGGATTTTCCGTTCCGAGTTGTGACAATGGTGAGAGTTAGTGTCTTAAATGATGCTCTGAAGAGTATGTACAATGCTGAGAAACGGGGGAAGCGTCAGGTCATGATTAGGCCATCCTCAAAAGTGATCATTAAATTTCTTTTGGTGATGCAGAAGCATGGGTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGGCTGGCAAAATTGTTGTTGAATTAAATGGAAGATTGAATAAATGTGGTGTTATTAGTCCCCGATTTGATGTGGGTGTCAAGGATATTGAACCTTGGACCGCAAGGCTACTTCCCTCAAGACAGTTTGGCTATATTGTCTTGACTACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGAAGGAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTTTACTAG 561 0.4135 MFLSVIGVCGIFIRDINLSYFKAFEMYWCLAFWLFLEKSRPHSRRFTEDFPFRVVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0817 186 Hamap 30S ribosomal protein S8 [rpsH]. 58 186 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele47g0817 186 Gene3D - 57 125 - -
Lele47g0817 186 FunFam 40S ribosomal protein S15a 57 125 - -
Lele47g0817 186 ProSitePatterns Ribosomal protein S8 signature. 156 173 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele47g0817 186 Gene3D - 126 186 - -
Lele47g0817 186 SUPERFAMILY Ribosomal protein S8 60 186 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele47g0817 186 PANTHER 40S RIBOSOMAL PROTEIN S15A 57 185 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele47g0817 186 FunFam 40S ribosomal protein S15a 126 186 - -
Lele47g0817 186 Pfam Ribosomal protein S8 63 186 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0817 Lele-ChrLele47 14566387 14570599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0817 57 186 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 1.12e-90 259