Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0805 ATGTGCATAAGAAAGGCCACAGAATGCTTATGTGTGTGTGATGTGTGTGTGAAAGAGAGAAGATTTTCATTCGTGCGGTTGACAGAAAAGGAAATTGATCCAGAGACAAGACCAGGAGATATGTCTCACATAGCTGTCGAGAGGAACAGGAGAAGACAGATGAACGAGCATCTCAAAGTTTTAAGGGCTTTGACCCCTTGTTTCTATATCAAAAGGGGAGACCAAGCATCAATAATAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAGTTCTGGAAGTTCTGGAATCGAAGAAAAGAAGAAGAAAGAGTGTAAGCCCTAGCCCAAGAACACCACTCCCACCGCCGCCACACCCAGCAAGCAGCTTGAGGGAGGAAGTTGGAGCAGCAAGCTGCAGTTCTTCAGTTGCAGATGTGCAAGTGAAAATCTCAGGCTCAAACGTGATTCTCAGAGTGACTTGCCACAGAGTTGCAGGTCAAGTTTCGAAGATAATCAGTGTTCTTGAAAGGCTCTCTTTTGAAGTCCTTCATCTCAATATAAGTAGCATGGAGGATACAGTTCTATACCACTTTGTTGTCAAGATAGGGTTGGAGTGCCAGTTGAGTCTGGAGGAACTAGCAATTGGAGTACAGCAAACTTTCTGCGATCAGAAGCTGTTAACTAGCACTGTCTGA 678 0.4454 MCIRKATECLCVCDVCVKERRFSFVRLTEKEIDPETRPGDMSHIAVERNRRRQMNEHLKVLRALTPCFYIKRGDQASIIGGVIEFIKELHQVLEVLESKKRRRKSVSPSPRTPLPPPPHPASSLREEVGAASCSSSVADVQVKISGSNVILRVTCHRVAGQVSKIISVLERLSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAIGVQQTFCDQKLLTSTV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0805 225 MobiDBLite consensus disorder prediction 102 126 - -
Lele47g0805 225 Pfam Helix-loop-helix DNA-binding domain 41 89 IPR011598 GO:0046983
Lele47g0805 225 PANTHER TRANSCRIPTION FACTOR FAMA 36 215 IPR044283 GO:0003700|GO:0010052
Lele47g0805 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 38 89 IPR011598 GO:0046983
Lele47g0805 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 114 IPR036638 GO:0046983
Lele47g0805 225 SMART finulus 44 95 IPR011598 GO:0046983
Lele47g0805 225 FunFam Transcription factor MUTE 41 107 - -
Lele47g0805 225 Gene3D - 33 105 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0805 Lele-ChrLele47 14422304 14424814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0805 41 224 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 62.376 6.43e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele47g0805 HLH 1.1e-07 No_clan