Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0803 ATGAGAGGATGCAAACAAGACTTTGTTCCACAAAGTTGTGATGAAACTTCTTCACGAGCACATCTCTTTGATTTATCTGAGATACAAGACACACATTTTCCGCGTTCTGACTATGAGCGCTTCGATCCAGTGACTGAGGATAGTGGCAGTTTGTGTGGTTGTATATTGGTTGGCCACAATAATCATAAGGAGCCCAAAGCTAGTCCATTTAAGCATAGCATGAATCTTAGAAGTTTCACTTATCATGAGTTGATGGAAGGAACAAATGGGTTCACAGAAGAATTGGGCCGCGGTGCATTCTCTCCTGTTTACAAAGGGGCTCTACCGGACATTCCAGGGAACCTTGTTGCTGTTAAAAGACTAAAAATGGTGAATGAAAGTGATCAGGAATTTGAAGCAGAAGTGAGCGCAATTGGTCAAACACACCATAGGAATTTGGCAAAACTTCTGGGATTCTGCAGGGAAGGAGAGCAAGGGCTGCTTGTGTATGAATTCATGAGTAAGGGAACTTTAGCAAGTTTTCTTTGTGATGAAGACCGAAGGCCAAGTTGGTATCAAAGAACTGCGACTACAACAGCAATTAGGGGAACTAAAGGGTATGTTGCAGCTGAGTGGATCAGGAACAAGCCAATTACACGACATGTTTACAGCTTTGGAGTTTTGTTATTGGAGCTCAAGACCTACACGAAGCAAGTTGAACAAATGCTTGAAGGATTCCTGAAGGTGCCAAATCCCCCTGCTCTCCCATCCTTTACAGGTCAATGATCATATCCTAGTGTCTCCAAGTTTTATGAATTAAAATTGGGATGTTACACGAGGTTGAAAAGGTGGGAAAAGGGATGTTTGGGTTTGGTATCACATGTGTATGTTTAG 873 0.4238 MRGCKQDFVPQSCDETSSRAHLFDLSEIQDTHFPRSDYERFDPVTEDSGSLCGCILVGHNNHKEPKASPFKHSMNLRSFTYHELMEGTNGFTEELGRGAFSPVYKGALPDIPGNLVAVKRLKMVNESDQEFEAEVSAIGQTHHRNLAKLLGFCREGEQGLLVYEFMSKGTLASFLCDEDRRPSWYQRTATTTAIRGTKGYVAAEWIRNKPITRHVYSFGVLLLELKTYTKQVEQMLEGFLKVPNPPALPSFTGQXSYPSVSKFYELKLGCYTRLKRWEKGCLGLVSHVYV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0803 290 Gene3D Phosphorylase Kinase; domain 1 54 165 - -
Lele47g0803 290 SUPERFAMILY Protein kinase-like (PK-like) 68 230 IPR011009 -
Lele47g0803 290 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 188 235 - -
Lele47g0803 290 Gene3D Transferase(Phosphotransferase) domain 1 167 257 - -
Lele47g0803 290 ProSiteProfiles Protein kinase domain profile. 89 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0803 290 FunFam S-receptor-like serine/threonine-protein kinase 59 165 - -
Lele47g0803 290 Pfam Protein tyrosine and serine/threonine kinase 91 181 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0803 Lele-ChrLele47 14411456 14413078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0803 79 222 Receptor kinase-like Gene Family AT3G55550 42.384 1.37e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele47g0803 PK_Tyr_Ser-Thr 6.4e-15 CL0016