Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0801 ATGGCTTTTGATTATAAGCTATATGCAGTCTTCTTGTTCTTCTTATTGCTTCCCTTGCTTTCACTTTCTGTTACTGCTCAGACTTCCAAAAACATCTCCCTTGGCTCTTCCCTCATTGCTGAAGAAGATGGCTCCTTCTGGGCTTCACCATTTGATGAATTTGCATTTGGGTTCCAACAAATTGAGGAAGATGGATTCTTACTAGCCATCTGGTTCAACAAAATACCAGAAACAACTGTTGTTTGGTCAGCCAATGGACAAAATCTTGCTCCAAAGGGTTCTAAAGTTGAGCTCACCTCAAATGGTTTGTTCCATCTGGTTAATCCCAACGGTAAGCAAATTTGGAATGCTACTAACACTTCAGGAAATAACCAAGTTGCTTATGCAGTCATGCTTGATTCTGGTAACTTTGTGTTAGTTGGTCATGACTTTCCAACTTTGTGGCAGAGTTTTGATCAACCCACTGACACAATTTTACCAGGACAAGTTTTGAATCAACCTGCTCGACTTGTTTCACGCTATCTGGCAACCGAGTTTTCAAGGGGAAGATTTCAGTTTGTTCTACAAGGTGTTGATGGGAATCTCGTGCTTTACACAACCCATTTCCCATTGGATGATGTGAATTTTCCTTACTGGACTACCCAAGTTTTTGGCTTTGGTTTCTCTTTGGTCTTCAACCAATCAGGCTACATATTTGTTCAAAGAAGTAATGGAAGTATAATCAAAGAAATATCAACACCAAATGCTCAATCTACTCAAGATTTCTATCAGAGAGCTGTTCTTGATTATGATGGAGTCTTCAGGCACTATATCTACTCCAAGAACAGTAGTTCCAACTCAGGAACTAGGCATGTGGCCTGGTCAACTCAGTCCTTCATACCTTCAAATATTTGTTTGAGAATTGTTGGAAAAACTGGAAGTGGAGCTTGTGGATTCAACAGTTATTGTAGCCATGATGATGATGGGACCAAGGTTTGCCATTGCCCAGCTGGTTACAGCTTCATTGATTCAGGAGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATGATGATGAAACTTCTTTGGAGACATATGACTTTGATCTCAATGAAGTGCAAAATATGGATTGGGAAGAATCTGACTATGAAGCTTTTAGAAATGTAACTGAGGATTGGTGCAGACATGCTTGCTTGGGTGATTGTTTTTGTGCTGCTGCTGTATTCAAAGATGAAGAATGTAGGAAGATGAAGAGACCACTCTCTAATGGAAGACTTGATTCTTCCTTTGAAGGGAAAGCACTGATTAAAATCAGAAAAAAAAATTCTACTGATGAAAAAAATGAGCATTATTCAAAGCTGATTGTTATTGGATCTACACTTTTAGGCAGTTCAGTGTTCTTCAATTTGTTATTGTCAGTGGTAGCATATGATGATAAAGAGGCTTTTGATGACATGAGGAGGGTTGAGAATTCAAAGGAAGGCACTTCCTTAACTGCTGGGGAAGACCACGACGACTCTTTCTGGGTTTCACCATCTGGTGATTTTGCATTTGGTTTCAAACAAATTGAGCAAGATGGGTTTTTACTAGCAATCCTGTTTAACAAAATACCAGTAGAAACTGTCGTCTGGTCATCCAATAGACAAAATCTTGCACCCAAGGGTTCTAAATTTGAGCTCACCTCAAATGGTTTGTTCCCACTTGTTGATCCCAATGGTAACCAGATTTCAGATGCTATCCCTTCATCAAGAAATGGAGTCACTCATGCAGCCATGCTTGATTCTGGCCCTATTTCTAACCCAAATGGTAGCTCTAGCAATGGAAGCCGGTCAACTTTGTCTGTAACACCTTCAAATATTTGTTTACGTGTTGAAGACGAGACGGGAAGTGGAGCTTGGGGTTTGAACAGTTATTGCACATTTGATGGGACCAATAAAAGTTGTCATTGTCCATATGGTTACAGTATCATTGATCCAAGGGATGTGATGAAAGGTTGCAAACAGGACTTTGTTACACAAAGTTGTGATCAGAATTCATTAGAAACAGATCTTTTTTATTTCAATGAGATTCCGAATACGGATTGGCCATTGTCTGATTATGAACACTTTCAAACAGTGTCCGAGGATTGAGAAGAACTTGGTCGTGGTGCATTTTCTACTGTTTACAAAGGTTCTCTACCCAACATTCCTTCAGGGAACCTCATTGCTGTGAAAAAGTTGAATATGGTGAAAGGAAGCAAGAAAGAATTCGAAGCAGAAGTGAGTGCCATTGGTAGAACACACCATAAGAATCTGCTGCAGCTTTTGGGATTCTGCAATGAAGGAGAAAACAGGCTACTTGTGTATCAATTCATAAGGAAGGGAACTTTAGCAAGTTTTCTTTCTGAAAACCAAAACCAAAACCAAAAGCCAAGTTGATTCAACCGACTTGTGGAAAACGATGTGGAAGCTCAAATTGACATGAAGAGGGTTGAAGAGTATGTGAAGATCGGTCTTTGGTGCATTCTGGAAGATCCATCACTGAGGCCAACAACCATGAAGCTAATTGTACGAATGCTTGAAGAATTCATGGATGTGCCAAATCCCCAATCTTTCATCCTTTACTAA 2598 0.3976 MAFDYKLYAVFLFFLLLPLLSLSVTAQTSKNISLGSSLIAEEDGSFWASPFDEFAFGFQQIEEDGFLLAIWFNKIPETTVVWSANGQNLAPKGSKVELTSNGLFHLVNPNGKQIWNATNTSGNNQVAYAVMLDSGNFVLVGHDFPTLWQSFDQPTDTILPGQVLNQPARLVSRYLATEFSRGRFQFVLQGVDGNLVLYTTHFPLDDVNFPYWTTQVFGFGFSLVFNQSGYIFVQRSNGSIIKEISTPNAQSTQDFYQRAVLDYDGVFRHYIYSKNSSSNSGTRHVAWSTQSFIPSNICLRIVGKTGSGACGFNSYCSHDDDGTKVCHCPAGYSFIDSGDVMKGCKQDFVSQSCDDDETSLETYDFDLNEVQNMDWEESDYEAFRNVTEDWCRHACLGDCFCAAAVFKDEECRKMKRPLSNGRLDSSFEGKALIKIRKKNSTDEKNEHYSKLIVIGSTLLGSSVFFNLLLSVVAYDDKEAFDDMRRVENSKEGTSLTAGEDHDDSFWVSPSGDFAFGFKQIEQDGFLLAILFNKIPVETVVWSSNRQNLAPKGSKFELTSNGLFPLVDPNGNQISDAIPSSRNGVTHAAMLDSGPISNPNGSSSNGSRSTLSVTPSNICLRVEDETGSGAWGLNSYCTFDGTNKSCHCPYGYSIIDPRDVMKGCKQDFVTQSCDQNSLETDLFYFNEIPNTDWPLSDYEHFQTVSEDXEELGRGAFSTVYKGSLPNIPSGNLIAVKKLNMVKGSKKEFEAEVSAIGRTHHKNLLQLLGFCNEGENRLLVYQFIRKGTLASFLSENQNQNQKPSXFNRLVENDVEAQIDMKRVEEYVKIGLWCILEDPSLRPTTMKLIVRMLEEFMDVPNPQSFILY 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0801 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 214 IPR036426 -
Lele47g0801 865 Gene3D - 155 291 IPR036426 -
Lele47g0801 865 ProSiteProfiles Bulb-type lectin domain profile. 23 152 IPR001480 -
Lele47g0801 865 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 26 152 - -
Lele47g0801 865 MobiDBLite consensus disorder prediction 592 608 - -
Lele47g0801 865 SUPERFAMILY Protein kinase-like (PK-like) 695 794 IPR011009 -
Lele47g0801 865 Gene3D - 489 630 IPR036426 -
Lele47g0801 865 Gene3D - 24 153 IPR036426 -
Lele47g0801 865 PIRSF SRK 2 504 IPR024171 GO:0004674
Lele47g0801 865 PIRSF SRK 601 708 IPR024171 GO:0004674
Lele47g0801 865 PIRSF SRK 482 604 IPR024171 GO:0004674
Lele47g0801 865 PIRSF SRK 796 864 IPR024171 GO:0004674
Lele47g0801 865 PIRSF SRK 696 801 IPR024171 GO:0004674
Lele47g0801 865 ProSitePatterns Protein kinases ATP-binding region signature. 710 736 IPR017441 GO:0005524
Lele47g0801 865 SMART blect_4 497 607 IPR001480 -
Lele47g0801 865 SMART blect_4 30 154 IPR001480 -
Lele47g0801 865 Pfam D-mannose binding lectin 79 165 IPR001480 -
Lele47g0801 865 MobiDBLite consensus disorder prediction 587 608 - -
Lele47g0801 865 Pfam Protein tyrosine and serine/threonine kinase 708 800 IPR001245 GO:0004672|GO:0006468
Lele47g0801 865 ProSiteProfiles Protein kinase domain profile. 704 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0801 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 525 595 IPR036426 -
Lele47g0801 865 Gene3D Phosphorylase Kinase; domain 1 677 781 - -
Lele47g0801 865 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 498 593 - -
Lele47g0801 865 CDD B_lectin 54 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0801 Lele-ChrLele47 14386618 14394434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0801 685 797 Receptor kinase-like Gene Family AT4G21410 38.462 3.27e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele47g0801 PK_Tyr_Ser-Thr 1.6e-14 CL0016