Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0799 ATGGATCAAAACCACCATGGGCTGTCTGGGGCTTCTGGTCAAGGAGCATATGGAATGAATCAGTATCAATCTAACCCAATGATGTCTGCTCCTCAGTCTCCTTCTCGGGCAGCATCAGGTCTTCCTGCATCATCTTCTTCCTTCCTGAGAGAGCAACAATATGCTCACCAGTACATGAATCAGCTTCAGCAACAGGAGCTGCGGCAACAACTCCAGAACTTCTGGGCAAATCAGTATCATGAGATTGAGCAGATTGTTGATTTCAAGAACCATAGCCTGCCTTTAGCTCGGATCAAGAAGATCATGAAGGCTGATGAGGATGTGAGGATGATATCAGCTGAGGCTCCAGTTATATTTGCCAGGGCCTGTGAGATGTTTATCCTGGAGTTAACACTCAGGTCTTGGATCAACGCTGAGGAGAACAAGAGGAGGACACTTCAGAAGAATGATATTGCTGCAGCAATCACAAAGACTGATGTGTTTGATTTCCTGGTTGATATTGTGCCAAGAGATGACTTGAAGGATGAAATACTCTCTGCAACAGTTCCCAGAGTCCCACCACCACCACCACCACCAGCAGCAGCAGCAGCAGCAGAGAATGTTCCTTACTACTACATGCCACCTCAGCAAGTTGTGGGCCCTCCTCCTCCTCATTCTCCATATGGAGCTCCAAAAGTGATCATGGGTAGACCTGTACTTGATCAAGCTCATTATGGCCAGCCAGCAGCACACCCTTCTTTCTCTGCACAAGTGTGGCCACACCAGCAAAACCCATCAAACAACAATTCAGATTCTTGA 798 0.4737 MDQNHHGLSGASGQGAYGMNQYQSNPMMSAPQSPSRAASGLPASSSSFLREQQYAHQYMNQLQQQELRQQLQNFWANQYHEIEQIVDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWINAEENKRRTLQKNDIAAAITKTDVFDFLVDIVPRDDLKDEILSATVPRVPPPPPPPAAAAAAENVPYYYMPPQQVVGPPPPHSPYGAPKVIMGRPVLDQAHYGQPAAHPSFSAQVWPHQQNPSNNNSDS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0799 265 FunFam Nuclear transcription factor Y subunit gamma 57 170 - -
Lele47g0799 265 SUPERFAMILY Histone-fold 66 164 IPR009072 GO:0046982
Lele47g0799 265 MobiDBLite consensus disorder prediction 232 265 - -
Lele47g0799 265 Gene3D Histone, subunit A 54 170 IPR009072 GO:0046982
Lele47g0799 265 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 92 155 IPR003958 -
Lele47g0799 265 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 52 193 - -
Lele47g0799 265 MobiDBLite consensus disorder prediction 249 265 - -
Lele47g0799 265 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0799 Lele-ChrLele47 14365213 14366010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0799 1 231 CCAAT-HAP5 Transcription Factor Family AT1G08970 58.442 4.00e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele47g0799 CBFD_NFYB_HMF 5e-17 CL0012