Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0790 ATGGCGATGGTAGACAGCATTATCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCCTCATCATTTTTGCCTGCAAACCATGGCGCTTCTTCTTATCTTCGCGACCCCGCTTATCCGTCAAGGATGGTGACATAGAAAGGCCCCTAGTTGTAGATGATGCAAATGCTTCACGTAATCAGAGCAATGAATTGCCCCGAGACTATGATCTTGAGGGTGCATGCTTTTTCAATGAGGGTCCTTTTCGCTCACCCCAATCACATGGACTTGTTCATAAGCAAAGGCTTCCCACTTCTTCTCCTAATGTGCCACAAGGTGATAGTTTGGTTTTAGAGGTAACTTCTGATGCTCCAGAAGAAGTTGCATTGGGTCAAACGCTTAAGCTTCCCCCAGCCCAGTTAGCTGAAATTCAAAAGCATGCTAGAGTGAATTTAGAAGAGCATAGATTGGAGGACCCTGTGCAAAGAGATATCTTAGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGAGTTCGTTGTTCTGTACAATCAACAAATCCTTCTCATCTACCTCTGACAATTGGAAGAATTTCTCCAAATATGGGTAGCCTGAATGGAACACTTTTGAATTCTCGGTCAATCAACCATACAGACACTAGCAACAGGCTTAGGGGTGAGCCATTTGAGCTTGCCAATGGAGATATTATAACTCTTGGAACAACATCAAAAGTCGCTGTCTGTATTTCTTCTGAAAGTAGGCGTCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGGAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTTGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAACTTTTTCCCGAAATAGTTGCTAGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTACATGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCGAACAGAAGCAAGCATGAATCACCATTATGAGGGATGTACAGCAACATTGCTTCTGGTGTGGGTTGATGGTGATGAAAATTTCTATGCACAATGTGCAAATGTTGGGGACTCTTCCTGTGTTATGAGTGTCAATGGGAAACAGATCAACATGACAAAAGATCATAAGATAGCAAATTCTTCTGAAAGACTTCGAATTGAAGAGAGGGGTGAGCCATTGAAAGATGGGGAAACCCGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAAGAAAGGGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAAGCAGTGCATATTGATCAAACAAGCCGTGCTTTTGCCATTCTAGCTAGCGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTGGTGCTTCAGGCGAGAGACATCTCGTCACTTGCAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGGTGGGTGAGGCTAGAACACACAGAACAAAGGATAATACCTCTGTAATTTTTCTTAGATTTTGA 1593 0.4262 MAMVDSIIILFLLLMLLLIIVLIIFACKPWRFFLSSRPRLSVKDGDIERPLVVDDANASRNQSNELPRDYDLEGACFFNEGPFRSPQSHGLVHKQRLPTSSPNVPQGDSLVLEVTSDAPEEVALGQTLKLPPAQLAEIQKHARVNLEEHRLEDPVQRDILDQRSCLTLEVISGPSCGVRCSVQSTNPSHLPLTIGRISPNMGSLNGTLLNSRSINHTDTSNRLRGEPFELANGDIITLGTTSKVAVCISSESRRQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFCICDGHGGDGAAKSASKLFPEIVASILSDSLKRERVLSLHDASDVLREAFSRTEASMNHHYEGCTATLLLVWVDGDENFYAQCANVGDSSCVMSVNGKQINMTKDHKIANSSERLRIEERGEPLKDGETRLYGINLARMLGDKFLKERDSRFSSEPYISQAVHIDQTSRAFAILASDGLWDVISMKKAIQLVLQARDISSLAENSAEKVANFLVGEARTHRTKDNTSVIFLRF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0790 530 Pfam Protein phosphatase 2C 270 523 IPR001932 -
Lele47g0790 530 PANTHER PROTEIN PHOSPHATASE 2C 255 527 IPR015655 GO:0004722|GO:0006470
Lele47g0790 530 FunFam Protein phosphatase 2C 70 267 530 - -
Lele47g0790 530 SUPERFAMILY PP2C-like 272 530 IPR036457 -
Lele47g0790 530 SUPERFAMILY SMAD/FHA domain 165 244 IPR008984 GO:0005515
Lele47g0790 530 ProSitePatterns PPM-type phosphatase domain signature. 296 304 IPR000222 GO:0043169
Lele47g0790 530 ProSiteProfiles PPM-type phosphatase domain profile. 259 530 IPR001932 -
Lele47g0790 530 CDD PP2Cc 271 530 IPR001932 -
Lele47g0790 530 Gene3D - 200 266 - -
Lele47g0790 530 SMART PP2C_4 253 528 IPR001932 -
Lele47g0790 530 CDD FHA 166 242 IPR000253 GO:0005515
Lele47g0790 530 Gene3D - 267 530 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0790 Lele-ChrLele47 14270799 14279566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0790 1 530 PP2C-type Phosphatase Gene Family AT5G19280 54.514 0.0 601