Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0786 ATGCGATCCATAGATATCAACGCATCTCTTGAAGACGATTCTGCTACTATAAACCTCGATTTCCCCCCTAACGATGACGTTCGTATCATAGGTTCTTGTCGAGGGTTTCTGCTTCTGCTACATACCAAAAAAGCAAAACTTGTTCTGTGGAATCCCTCAACTTCTGAATCCAAAAAGATCCCAATTCCTCTTCCAATGTCGTATTTTGAGATGTTTGGCCTTTGTTATAATGAATCCACGGATGACTACTTAACAGTTCTCGCATCATTAACGAAGCCCAATCCATTATCTGATAATGCAGTTTTAGGGTTTCTGGTCTTCTCTGTTAGAACCAATTCATGGGAAAAACTTTATTCCAACATCATCAGTTGCCGAAGAATCAGTGTGATGGGTAATCCAGGGGTTGGTTCAGTAGTAAACGGTGTCATTCATTGGTTAGTTTGGTTTCTTGAGGCAACACCGGAACCACGTGGTAGTTATAGTCCACGGGGTCCAAATGTTTTCGACTTTGCCTCTATCATCGCTTTAGAGTCGTGTCGAGTTCGTTCATCGGAGATCGATATTGTCATCCCCTACGTATTTACATCAGCCTTCCACCATCGTAGTCATCCCCAGCCTCCATCGATGAACTCACGGCTTCCATCTTCAAATGGCGAAGAAGACCCGAGAGATGTTAGTTATATAACTGACTTTGAAAGGCCAGGAATGCGTCATGGATTCTGTGGAGGGTCAGGGTTTCAGAAGCTTAGAGGAGAGTTCATGGAGTATTGGAGACTGCTTGTTGGGTTAAATCTGTCACTTATTTCTAAGGACCAAAAACATATTGTTAGAAATTGGCTGAATATGGCTCTCCAGAAATATCTTCCATCTGGTGATGCACCCACTGTGAATATGAAACGTCTGACTTTTACTAGTAAGGTGCGTGACAAGGGTCAGCTGGGGGTGGCAGGTCGGAATCATGCCTTGGATGCGGATGTTGACCTTAGAGAAGTTTATTTTCTCATTATGCATTTTCTTTCTTCCGGGCCATGTCATAGAACTTGTGTTCAATTATGGAATGAGCTTCTTGAGCATCAACTCTTACCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGATGCCTAGTGGAGATGAAGATGATAACGGCCTATCATTCCCTTTAAGTTACAATCAGTTGGTGGAAAGGTATCCTCATGTTGAAAAGGACCACTTGTTAAAGCTTTTGAAGCAATTGATATCTAGCGCAGCATCCCCATCATTTGGCAGGAGTTGTGGAAATGTTCCCAATGCAGCTGATGTACCTACTCTTCTTGGAATGGGTTCCTTTTCACTTCTGGGTGGTAGGGACAAAACGAATGAAGTTAAACGAACACCACCTTATATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCAAGGACTTCGTTTAAGGGAAATTGGGGGTGGTTTCACTAGGCACCATCGTGCCCCATCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCGACCATGGTACAGAAGATGGAAAATATCAAGAGGATAAGAGGACACCGTAATGCTGTTTATTGTGCTACATTTGACCGGTCTGGGAGGTATGTCATTACCGGGTCAGATGATCGACTTGGTGACATCACTGACTTAGCTATCAGTTCAAACAACACCTTAGTTGCATCCTCTTCAAATGATTGTATCGTACGAATTTGGCGCTTGCCTGATGGCCTTCCAATATCAGTTTTGCGGGGTCATACTGGAGCAGTCACTGCTATAGCATTTAGTCCTAGACCTAGTGCTATCTACCAACTTTTATCGTCGTCTGATGATGGAACTTGTAGAATTTGGGATGCAAGGCATTCCCAATCAAGTCTGCGAATATATGTCCCACGGCCTTCTGATTCTGTTATTGGTCAGAGCAATGGCCCATCTTCGAGTAATTTTCCACAGAGCCATCAGATTTTTTGTTGTGCATTTAATGCTAGTGGAACTGTCTTTGTCACTGGGAGTTCTGACAATCTTGCCAGGGTATGGAATGCTTGTAAACCAAGCCTGGATGATTCTGACCAACCGAATTATGAGATAGATGTGTTATCAGGGCATGAAAATGATGTTAATTATGTGCAATTCAGTGGATGTGCAGTTGCTTCTCGATTCTCCACAGCAGACACTTGGAAGGAGGATAATATTCCCAAATTCAAGAATTCCTGGTTCAATCATGACAATATAGTTACCTGCTCTCGTGATGGGAGTGCTATTATATGGATTTCCAAAGCACGTAGGTCACATGGAAAATCTGGTCGATGGACACGGGCATATCATCTTAGAGTTCCACCTCCTCCAATGCCTCCTCAACCTCAGAGAGGGGGTCCCCGTCAGCGAATATTACCAACGCCACGTGGTGTAAATATGATTATTTGGAGCCTAGACAACCGCTTTGTTCTTGCAGCGATCATGGATTGCAGAATTTGTGTTTGGAATGCTTCTGATGGCAGCTTAGTGCACTCATTGACTGGACATACTGAATCTACATATGTTCTGGATGTTCATCCATTCAACCCTCGGATAGCTATGAGTGCTGGATATGATGGAAGAACCATTGTGTGGGATCTAGTTGATGGAAAATTTTCCCCAGATGGGACATCCATTATACTTTCAGATGATGTCGGTCAATTGTACATATTAAGTACTGGTCAGGGTGAGTCTCAGAATGATGCCAAATATGATCAGTTCTTCCTCGGTGATTATCGCCCCCTCATTCAAGATACCCATGGTAGTGTGCTTGACCAGGAAACTCAGCTTGTTCCATATCGACGGAATTTGCAAGATCTGCTATGTGATTCAGCAATGATACCATACCCTGAACCTTATCAGAGTGAATATCAGCGAAGACGTTTAGGAGCTTTAGGCATTGAGTGGCGCCCTTCATCACAAAGGCTTGCTGTTGGTCCTGATTTTAGTCTGGACCCAGAATATCAGATGTTTCCAGTGGTCGACTTAGACATGCTAGCAGAACCACTGCCTGAATTTATAGATGCTATGGATTGGGAACCAGAAAATGAAGTGCATAGTGATGATAATGATTCAGAGTATAATGTCACTGAAGATTACTCTTCTGGGGGCGACAAAGAATGTTCAAGTTCCAATGCCTCCGGTGATCCAGGTTGCAGTATAGATGACAGTGAGGAGGAGGGGACTCAGATGGATGGCAATCGTAGATTGAAAAGGAAAAAACAGAAGACTGAAACTGAGATTATGACTTCTTCTGGGAGACGTGTGAAAAGGAGGAATTTGGATGAGTGTGATGATAATGCCTTGAGGAACAACCGAAGTAGGAAAGGAAGAAGTGGCCGAAAAGCATCTAGTAGGAGATCATCTAAATCAAAATCTTCAAGGCCTCGAAGAGCTGCTGCACGCAATGCTCTGCATTTATTTTCTAGAATTACAGGTACACCCACAGATGGAGAAGAAGATAGTTTTGAAGGTGATTTTTCAGGTAGTGAATCATCATTGCTAGAGTCTGAAAGTAATGAATCTGATAGAGATTTGCATGATGATCAACAAAGATATTTGAAGGGGAAGGAAGTATCAATTGACGAATCTGAGGACATGAAATCTCACGAACTTCCTGAGACTCATACTAATGCAGTGAACAGGAGGAGATTGATTCTTAAGTTGCCATTTCGAGACTCTAAATCTGTGCTTGAGACCACCGAGCATAAGTTTGGCAATCAAGCTGAGTTGATTGCCTCATCGTCTAAGTCTGCTCAGCAAGCTACTGATATCAATAGGAACAGATCAAGTTCTAAGGAGCTTGTGTATGATTCTGGAAGTGAAAATCATCATAACTTAGATCATATAGAAGATACTGTAGATTTGTTTGATGGCTATATGAAAGGAAAAATTCGATGGGGAGTGGTTAGGGCTCGTACATCTAGGGGTCCAAGAGTGGGAGAAGCTGTGCCATCAGATGCAAATGTCAGGCCTGTTATTTGTTTCAATGATAAGCAAAATTTTGTCAATGTTCATGAGAAAGAGGACAAGGACTTCAGTACACAGTCCCCTCCTTTGGAAATCCAAAAGGATGAGGAAAAGATAGATGAGAATTGTGTTGCTACTGCCTCAGAGCCTCAAAATACTTCTGAGAATGAAATTTGGCCCTTAGCTTCTAGCAATTACAGGGATAAAGATGAAGCTCTAACTTCTGACATGGATGCTCAACGTACACCTATTGGTTCTATTAACCTCAGTAGTGAACCTGATCATCAGTCAGAAACATATATTGTTTTTCCTTCTGTTTCAACGAAGGTAAGGTCTAAAAGGAGTTCAAGGGACCTTGAAAGTCCAGCCAAGAATGAAACAAAACCTTTAGTGCCTAAGAGTGGTTGCTCCGGCACTACAGTAGATGATTTGAACGATGAACAGAATATAGTTTTGGCTGCAGATGACAACACTATATCAAAATCAAATCAAGGAGATAATGAAGTTCGAGAGATAAATGCACAGGTTGACAAAAATTTTACATCACATGATTCCCTGGAGCCCCAATCACATAGAGATAAAATGTATAAAGCTGTTTATAGGAGATCAAGGTCACATAGGGCTGTGACTAATGCAGGTGATGGTAGTGGCCCGGGAGAATCCACATCAAATGGGAGTAACAATAATCTCAACCTGGCAGTGGACCGTGTCAATAGAACAAATGAACCAGATCATACCGCTTGGTCCTTAGATGCAGAACCAGCTACTTCTGACCCGAATAATGGATGGAATAATCTCAAAATTCATCAAGCTCATGAATATTGTACTATTAGAAATCCCCAGAATGGTTCCTCAAACAGAGGACAACCAACAGAAGACGAGCGAGGTTCTAGTTCAAAAGTCACAGTTGGATTGAGGTCCACCAGGCATCGGAGGGTTAGTTATCATCATATCCATGAGAGTAGTCCTCCAATTAGGAAAAAGTCATCTCAATCAAACACTAAAGGATCATGGTTGTTGTTGTCAACACATGAGGAAGGATGCAGATATATCCCCCAACAGGCAGATGAAGTTGTATATCTGAGACAGGGGCACCAGGAGTATATAGAATATAGTGTTGCAAGAGAATCAGGCCCGTGGACATCATTGAAGGGACAAGTAAGAGCTGTAGAATACTGTAGGGTCCAATGCCTTGAGTATTCTACAGTTCCAGGGTCTGGCGATAGCTGCTGCAAAATGACCCTTCAATTTGTAGATCCTGCTTCAAGTGTCGCTGGCAAATCTTTTAAGTTGTCCCTACCTGAAGTGACTGGTTTTCCAGATTTTCTTGTTGAAAGAACTAGGTTTGATGCTGCAATGGCAAGAAACTGGACACACAGGGATAAATGTAGGGTTTGGTGGAAAAATGAGGGTGACTTTGATGGGAGTTGGTGGGATGGTCGTATTCTGTGTGTTAAAACCAAGTCTTCGGACTTTCCAGACAGTCCATGGGAGAGGTATACCATTCGATACAAGAATGACCCGATGGAAACACATTTACATAGCCCTTGGGAGCTTTTTGATGCTGATACTGAATGGGAACAACCTCATATTGATGATTCAAAGAGAACCAAGCTTCTATCTGCCTTTGAAAAATTGCTGCAGTCAGGCAACAGAGATCAGGATCGATATGGGGTTCGAGAACTGAACAAAGTTTCAAATAAGTCAAAATTTATAAACAGGTTTCCTGTTCCTCTCACCATTGAGTTGATACATTCAAGGTTGGAGAACAATTACTACCGGACTTTAGAGGCACTTGAGCATGATATGACAGTTCTTCTGTCCAATTCTTCTTCTTTCTTTGAAAAGGATGCAGAGCTCTCAGCAAAAGTAAGGCGCTTATCAGAATGGTTTACACGGACATTTTCATCTCTATAG 5895 0.4239 MRSIDINASLEDDSATINLDFPPNDDVRIIGSCRGFLLLLHTKKAKLVLWNPSTSESKKIPIPLPMSYFEMFGLCYNESTDDYLTVLASLTKPNPLSDNAVLGFLVFSVRTNSWEKLYSNIISCRRISVMGNPGVGSVVNGVIHWLVWFLEATPEPRGSYSPRGPNVFDFASIIALESCRVRSSEIDIVIPYVFTSAFHHRSHPQPPSMNSRLPSSNGEEDPRDVSYITDFERPGMRHGFCGGSGFQKLRGEFMEYWRLLVGLNLSLISKDQKHIVRNWLNMALQKYLPSGDAPTVNMKRLTFTSKVRDKGQLGVAGRNHALDADVDLREVYFLIMHFLSSGPCHRTCVQLWNELLEHQLLPRRYHAWYSRSGMPSGDEDDNGLSFPLSYNQLVERYPHVEKDHLLKLLKQLISSAASPSFGRSCGNVPNAADVPTLLGMGSFSLLGGRDKTNEVKRTPPYMRWPHMKANQVQGLRLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMENIKRIRGHRNAVYCATFDRSGRYVITGSDDRLGDITDLAISSNNTLVASSSNDCIVRIWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARHSQSSLRIYVPRPSDSVIGQSNGPSSSNFPQSHQIFCCAFNASGTVFVTGSSDNLARVWNACKPSLDDSDQPNYEIDVLSGHENDVNYVQFSGCAVASRFSTADTWKEDNIPKFKNSWFNHDNIVTCSRDGSAIIWISKARRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQNDAKYDQFFLGDYRPLIQDTHGSVLDQETQLVPYRRNLQDLLCDSAMIPYPEPYQSEYQRRRLGALGIEWRPSSQRLAVGPDFSLDPEYQMFPVVDLDMLAEPLPEFIDAMDWEPENEVHSDDNDSEYNVTEDYSSGGDKECSSSNASGDPGCSIDDSEEEGTQMDGNRRLKRKKQKTETEIMTSSGRRVKRRNLDECDDNALRNNRSRKGRSGRKASSRRSSKSKSSRPRRAAARNALHLFSRITGTPTDGEEDSFEGDFSGSESSLLESESNESDRDLHDDQQRYLKGKEVSIDESEDMKSHELPETHTNAVNRRRLILKLPFRDSKSVLETTEHKFGNQAELIASSSKSAQQATDINRNRSSSKELVYDSGSENHHNLDHIEDTVDLFDGYMKGKIRWGVVRARTSRGPRVGEAVPSDANVRPVICFNDKQNFVNVHEKEDKDFSTQSPPLEIQKDEEKIDENCVATASEPQNTSENEIWPLASSNYRDKDEALTSDMDAQRTPIGSINLSSEPDHQSETYIVFPSVSTKVRSKRSSRDLESPAKNETKPLVPKSGCSGTTVDDLNDEQNIVLAADDNTISKSNQGDNEVREINAQVDKNFTSHDSLEPQSHRDKMYKAVYRRSRSHRAVTNAGDGSGPGESTSNGSNNNLNLAVDRVNRTNEPDHTAWSLDAEPATSDPNNGWNNLKIHQAHEYCTIRNPQNGSSNRGQPTEDERGSSSKVTVGLRSTRHRRVSYHHIHESSPPIRKKSSQSNTKGSWLLLSTHEEGCRYIPQQADEVVYLRQGHQEYIEYSVARESGPWTSLKGQVRAVEYCRVQCLEYSTVPGSGDSCCKMTLQFVDPASSVAGKSFKLSLPEVTGFPDFLVERTRFDAAMARNWTHRDKCRVWWKNEGDFDGSWWDGRILCVKTKSSDFPDSPWERYTIRYKNDPMETHLHSPWELFDADTEWEQPHIDDSKRTKLLSAFEKLLQSGNRDQDRYGVRELNKVSNKSKFINRFPVPLTIELIHSRLENNYYRTLEALEHDMTVLLSNSSSFFEKDAELSAKVRRLSEWFTRTFSSL 1964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0786 1964 Pfam Bromodomain 1901 1948 IPR001487 GO:0005515
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats profile. 539 580 IPR001680 GO:0005515
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 581 616 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1194 1213 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1018 1184 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1032 1054 - -
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats profile. 516 542 IPR001680 GO:0005515
Lele47g0786 1964 Pfam WD domain, G-beta repeat 577 616 IPR001680 GO:0005515
Lele47g0786 1964 Pfam WD domain, G-beta repeat 545 570 IPR001680 GO:0005515
Lele47g0786 1964 Pfam WD domain, G-beta repeat 650 678 IPR001680 GO:0005515
Lele47g0786 1964 Pfam WD domain, G-beta repeat 512 542 IPR001680 GO:0005515
Lele47g0786 1964 Pfam WD domain, G-beta repeat 830 869 IPR001680 GO:0005515
Lele47g0786 1964 CDD WD40 512 869 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1437 1467 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1541 1556 - -
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats profile. 581 625 IPR001680 GO:0005515
Lele47g0786 1964 Gene3D - 499 641 IPR015943 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1603 1632 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1405 1425 - -
Lele47g0786 1964 PANTHER WD REPEAT DOMAIN 9 322 1962 - -
Lele47g0786 1964 FunFam WD40/YVTN repeat-like-containing domain 1858 1964 - -
Lele47g0786 1964 ProSitePatterns Trp-Asp (WD) repeats signature. 856 870 IPR019775 -
Lele47g0786 1964 SUPERFAMILY WD40 repeat-like 508 895 IPR036322 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 200 223 - -
Lele47g0786 1964 Gene3D - 791 909 IPR015943 GO:0005515
Lele47g0786 1964 FunFam Bromodomain and WD repeat-containing protein 791 909 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1528 1556 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 201 216 - -
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats profile. 836 870 IPR001680 GO:0005515
Lele47g0786 1964 ProSiteProfiles Trp-Asp (WD) repeats profile. 646 678 IPR001680 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1110 1135 - -
Lele47g0786 1964 Gene3D - 1857 1964 IPR036427 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1570 1589 - -
Lele47g0786 1964 Gene3D - 648 781 IPR015943 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1603 1630 - -
Lele47g0786 1964 CDD Bromo_WDR9_I_like 1835 1964 - -
Lele47g0786 1964 SUPERFAMILY Bromodomain 1899 1962 IPR036427 GO:0005515
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1402 1425 - -
Lele47g0786 1964 MobiDBLite consensus disorder prediction 1064 1109 - -
Lele47g0786 1964 SMART WD40_4 509 571 IPR001680 GO:0005515
Lele47g0786 1964 SMART WD40_4 640 678 IPR001680 GO:0005515
Lele47g0786 1964 SMART WD40_4 829 869 IPR001680 GO:0005515
Lele47g0786 1964 SMART WD40_4 574 616 IPR001680 GO:0005515
Lele47g0786 1964 SMART WD40_4 788 826 IPR001680 GO:0005515
Lele47g0786 1964 SMART WD40_4 690 755 IPR001680 GO:0005515
Lele47g0786 1964 FunFam Bromodomain and WD repeat domain-containing protein 643 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0786 Lele-ChrLele47 14197330 14219238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0786 459 722 Eukaryotic Initiation Factors Gene Family AT2G46290 23.279 2.98e-06 49.7