Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0778 ATGGCAAATCGGCTGAAGGAAGATGAGAAAAATGAGCGAGTAATTCGAGGTCTTCTCAAACTTCCAGCGAATCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATATGTGTGCACAAATTTCTCAACGTTTGTTTGCACAAACTGTAGTGGGATACACCGGGAATTTACACATCGAGTAAAGTCAATATCAATGGCCAAGTTCACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCAAAAGAAGTTTATTTTAAAGAGTGGGACCAGAAAAGTCATTTTCTCCCTGATAACAGTGATGTTGGCAGGGTCCGCAGCTTTATTAAACAAGTTTATGTGGATAAAAGATTCACTGGTGAGAGGACCGACAAATCACGAAGAGTAAATACAGGTGACAAGGATCATTTCTCAGAAAACTCGAGAGTTCAATCATATCAGGGTGGTCCTAAAAGCCCACCATATGATGACACATATAAACACCAATATACTGACAGCTCTAGTCCAGGTGGAAGAAGTCCTGGGTATGATCAAGAAAGTAGGCAGTATGGTAATGATAAGAGAAGTCCTGGTCATCCTCCAATTATCAATGATTGGCATCGAGAAGATAGATTTGGAGATGGAAGGAGGTTTGAAGGTTGTAGAGTATCTGATGGAGATTATAAGCTGGAGGGCCAATTGCCTGGGCAAACCAACAACCTGGATTCTTCAAGTCCACCCGTGTTTCGGTCTGTAAGAGATATTTTGGGAGAAAATGCAGCGCCTCTTCAAATTAGTGAACCTCCTGAAACAAATAGTAAAAAGGCTAATGATGGCTCAGCTCTCACACAGAGGACAGTATCTTCCAGTAGCTTGGCATCCAGCGTTGGAAACCCTGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAGCCTCCTCTAGCTCCAGCAATTACTCATGCCCAACAAACTACCGCCCAATCCATTATGGAGCAACCAAATTCCAGCGATTTCAACAATTGGGCCTCTTTTGATATGGCCGTAGGAGCAAAAGCAACGCCAACTCCTTCAAATGTAAATACACTAGAATCTATGCTTTCCCAATTGTCAGTATCATCATCATTACCAGCGCATGCTCAAGTCCAACATGGTTCCAGTGTCGTAAAACCTTTTACTGGGAGCAGTATGACATTACTAAGAACTGGGAACTTATCTGTTTCCCCTGCTGGGCCTGCACCAGCACCATCTCTTACTGCGACAGCCGTTGGAGCTACAACTATTAGCAGCTATACAACTTTTCCATCCAGTGTTGCTCTAGCATCGCAGCATCCACAGCCTTTGTTCCCTCCCAATGTTGGTCAGTCTTCAACTCATCAGTCTACACTACCGCCAGTAGGAGCATTGAATTATCAGCCATGGAGTATACCTCCAGCACCAACGATACAAGGCTATACAAGCATGCCACTGCCACATGTGCGCCATCTTATCTCTAAGCCTGCCACTGAGACTAGCTCCAGTGCGGCTTCAGGACTGATTGTAGAAGTAAAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTTTTTACTGTAAAGTATTCTTCCTTCCCTGCTGCAGTTCCAGGGTGGCAAATGGTTCCTCCTCATTGTATGGGAATCTCCATGCCATATAATACTGTGCCCATGCCAAGTCTTCAGCGACCGTCAAAACCAACGAATCCATTTGATATAGGCAGTGAACCACCTCCAGTTCAAACCACAACTAGATCATCCTTGCAAGGGGCTCTGCCAAGTGTATCAACTTCAGGTTATTCCGCCTTTTTTCCCCTGTATGCTGATCTGTGTGTTTTGAAAACCTTAGGGCCTTACATGGGGCAACAAGTGCAAACGAGCTTGGCAATGCCAAGGCATCAGGAAATTGGGAGCTTTGGTGCTGAGGGAGCTGCTTATGGCTTCTCAAACTTGGATCAGCGTCTGACTGGTCCATTCTCAACCCCTGCTTCCTCAAATCTCTCTTCTGCGGGAAGGAATCCATTTGGATGA 2052 0.4488 MANRLKEDEKNERVIRGLLKLPANRRCINCDSLGPQYVCTNFSTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEVYFKEWDQKSHFLPDNSDVGRVRSFIKQVYVDKRFTGERTDKSRRVNTGDKDHFSENSRVQSYQGGPKSPPYDDTYKHQYTDSSSPGGRSPGYDQESRQYGNDKRSPGHPPIINDWHREDRFGDGRRFEGCRVSDGDYKLEGQLPGQTNNLDSSSPPVFRSVRDILGENAAPLQISEPPETNSKKANDGSALTQRTVSSSSLASSVGNPAEVKLETTKSLIDFDAEPEPPLAPAITHAQQTTAQSIMEQPNSSDFNNWASFDMAVGAKATPTPSNVNTLESMLSQLSVSSSLPAHAQVQHGSSVVKPFTGSSMTLLRTGNLSVSPAGPAPAPSLTATAVGATTISSYTTFPSSVALASQHPQPLFPPNVGQSSTHQSTLPPVGALNYQPWSIPPAPTIQGYTSMPLPHVRHLISKPATETSSSAASGLIVEVKPSGRKELPEDLFTVKYSSFPAAVPGWQMVPPHCMGISMPYNTVPMPSLQRPSKPTNPFDIGSEPPPVQTTTRSSLQGALPSVSTSGYSAFFPLYADLCVLKTLGPYMGQQVQTSLAMPRHQEIGSFGAEGAAYGFSNLDQRLTGPFSTPASSNLSSAGRNPFG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0778 683 MobiDBLite consensus disorder prediction 664 683 - -
Lele47g0778 683 MobiDBLite consensus disorder prediction 128 144 - -
Lele47g0778 683 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lele47g0778 683 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lele47g0778 683 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lele47g0778 683 CDD ArfGap_AGFG 12 122 - -
Lele47g0778 683 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Lele47g0778 683 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Lele47g0778 683 MobiDBLite consensus disorder prediction 262 297 - -
Lele47g0778 683 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Lele47g0778 683 MobiDBLite consensus disorder prediction 163 184 - -
Lele47g0778 683 MobiDBLite consensus disorder prediction 257 297 - -
Lele47g0778 683 MobiDBLite consensus disorder prediction 565 594 - -
Lele47g0778 683 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lele47g0778 683 MobiDBLite consensus disorder prediction 226 245 - -
Lele47g0778 683 MobiDBLite consensus disorder prediction 128 207 - -
Lele47g0778 683 MobiDBLite consensus disorder prediction 230 244 - -
Lele47g0778 683 Gene3D Arf GTPase activating protein 1 135 IPR038508 -
Lele47g0778 683 PANTHER ARFGAP/RECO-RELATED 1 683 IPR044820 GO:0005096
Lele47g0778 683 MobiDBLite consensus disorder prediction 445 464 - -
Lele47g0778 683 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0778 Lele-ChrLele47 14102826 14108628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0778 12 122 C2H2 Transcription Factor Family AT4G05330 34.146 1.86e-12 67.4