Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0776 ATGAAGAGGAAGGTCTATTTCCATCTTCTCATTGCCTTCTTCTTAGGCGCAGTCTCTCTCTCTGCCTCCGCCGATGTCCCCGTCACCAGCCATGGAGCTCTCACTGACGCCGAGGCCATGTACATCAGGCAACGTCAGCTTCTTTCCTACAGGGATGAGTTCGGCGACAGAGGAGAACTAGTCACCGTCGATCCTTCCCTGGTTTTCGAGAACAATCGCATTAGAAATGCCTATATAGCCTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGAACAATTGTACGCTCAATTGGGTTGGAGCCAATGTCTGTAACTATAGTAACGTTTTCTGTGCTCTGGCGCTCGACAACTCTAAGATTCGTACTGTCGCCGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAAGAGCTTGGACTACTCTCCGATCTTGCTCTCCTCCACATCAACACTAACAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTTCTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCCGCTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAAGGGACTGTGCCTAGAGAGCTTTTTGATAAGGATCTGGACGCGATATTTATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAATTTTGGGAACTCTCCGGTGTCGGTCATCGTCGTAGCCAACAATAAGTTCCATGGCTGTCTCCCGGCGAGCTTGGGCAACATGACGAACATGAACGAGATCATTCTGTTGAATAATGCCCTGCGTTCATGCTTGCCGTCAGAGATTGGGTTGCTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGTTGTTGGGTCCTTTGCCAGACACCATTGGAGGCATGGTGAGCCTGGAGCAGTTGAATGTAGCTCACAATTTACTTTCTGGGAAAATTCCAGGGAGCATTTGTATGCTGCCAAATTTACAGAACTTTACATATTCATATAACTTCTTCACTGGTGAGCCACCATCTTGCCTCAGCTTGCCATCGTTCGATGATCGGAGGAACTGCTTGCCGGCTAGGCCATTACAGAGGTCAGCGGCACAATGCAAGGCTTTCTTGTCACGACCTGTGGACTGTAACTCGTTTAAATGTAAGCCATTTGTGCGTTCGCTTCCTCCACCTCCTAACCCTTCCCCTCCGATTCCTGTACCTTCCCCACCACCCGTGGTCGTATCTTCACCTCCTCCATCACCGGTTTACGTTCCACCTTCTTCGCCTCCACCTTCACCGCCACCACCTTCGCCGCCACCTCCGGTGTATTCGCCCCCACCGCCTCCTTCATCCCCACCTCCGCCGGTTTATTCACCACCTCCTCCTCCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCACCACCCCCACCTTCACCTCCTCCGCCAGTCTATTCTCCGCCCCCGCCACCACCGTCACCTCCCCCTCCTTCGCCACCCCCACCAGTCTATTCACCACCTCCACCTCCACCTCCTTCTCCATCGCCACCTCCACCCTCCCCGCCCCCTCCATCTCCTCCACCTCCATCACCCACTCCAACACCACCATATTGCGTCCGTTCTCCACCGCCACCACCAAATTCACCACCGCCACCGTCTCCTGGATTTTACCCACCACCGACTTACAGCTCCCCTCCGCCACCTTATCACTCCCCTCCACCACCTTATCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCTCCGCCACCTCCTCCTCCAGTCCATTCCCCTCCTCCCCCTGTCCATTCACCACCCCCACCTTGTATAGAACCACCTCCACCCCCACCACCTTGTGAAGAGCATCCGCCACCGCAACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCCCCTCCACCGCCATCTCCTGTGCACTACAGTTCTCCGCCGCCGCCGCCGCCGCCAGCCGTTCATTACAGTTCTCCCCCACCACCAGTATATCCTTCAATTCCACCACCATCACCGCCTCCCTGTGAAGAAACTCCACCTTCTGCGTCCCCACCGCCACCAGTCACATACGGAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2226 0.5355 MKRKVYFHLLIAFFLGAVSLSASADVPVTSHGALTDAEAMYIRQRQLLSYRDEFGDRGELVTVDPSLVFENNRIRNAYIALQAWKQAILSDPNNCTLNWVGANVCNYSNVFCALALDNSKIRTVAGIDLNHCDIAGYLPEELGLLSDLALLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPALKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNMNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAAQCKAFLSRPVDCNSFKCKPFVRSLPPPPNPSPPIPVPSPPPVVVSSPPPSPVYVPPSSPPPSPPPPSPPPPVYSPPPPPSSPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPPSPSPPPPSPPPPSPPPPSPTPTPPYCVRSPPPPPNSPPPPSPGFYPPPTYSSPPPPYHSPPPPYHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVHSPPPPCIEPPPPPPPCEEHPPPQPSPTPYLPPPSPSPPPPPSPVHYSSPPPPPPPAVHYSSPPPPVYPSIPPPSPPPCEETPPSASPPPPVTYGNPPPAPVYEGPLPPVFGVSYASPPPPPFY 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0776 741 Gene3D Ribonuclease Inhibitor 78 238 IPR032675 -
Lele47g0776 741 SUPERFAMILY L domain-like 78 361 - -
Lele47g0776 741 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
Lele47g0776 741 MobiDBLite consensus disorder prediction 417 728 - -
Lele47g0776 741 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Lele47g0776 741 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 526 - -
Lele47g0776 741 PRINTS Proline rich extensin signature 403 419 - -
Lele47g0776 741 PRINTS Proline rich extensin signature 451 472 - -
Lele47g0776 741 PRINTS Proline rich extensin signature 435 447 - -
Lele47g0776 741 Gene3D Ribonuclease Inhibitor 239 368 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0776 Lele-ChrLele47 14080020 14082245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0776 23 519 Leucine-rich Repeat extension Gene Families AT3G24480 67.530 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0615 45 5056362 5060376 Lele47g0776 47 14080020 14082245 hybridization
Lele46g0656 46 4755110 4757347 Lele47g0776 47 14080020 14082245 hybridization