Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0761 ATGGTGAGCGATCCTAGCACCGATGCTCTTATCACTTGGGGGCGAGCTAACAATAGCTTCATTGTCTTCGATCCTTTGGATTTCTCTCGGATGATTCTACCTGCATACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGTCAGTTAAACACCTACGGGTTTAGAAAGGTGGATCCAGATCGATGGGAATTCGCGAACGAGTGGTTTCTTCGGGAGCAGAAGCACTTGTTGAAGAATATTGTGAGGAGGAAACAAAGTAGGAGTAGTAGCTATTTGTCGTTGTTTCAGGGGAAGAATAATGAGGAGGTGGAAGACGAAGTGTTGATGATGGAGATTGCGAGGTTGAAGGAAGAACAGAAATCTTTGGATGAAGAACTTCAAGGGATGAATAAGAGATTGGAGACCACAGAGAAACGACCTCAGCAAATGATGGCGTTTCTGTACAAAGTCGTCGAGGACCCAGAGGTCCTTTCTCGGATTTTGTTGGAGAAAAAGCAGAAGCAATTGGGAGAGAAGAGGCGGCGGTTGATATCATCATCGCCGTCGTCTTCTTCTGGTATGGCGACGGTGAAGATGGAGTTTGAGGAAGAGGAAGCTGCTTCTTTGGGTGGTGCGATAATATCTTCGCCGTCGCCGGAAACGACTACAATTGGTTTTGAGTTCGGTAGATATAGTCAGGCATCGCCACCGCCGACGGAGGAAACAGTAATCTCCGGCACCGATACGAGTTCGGGTTGGTGGAGCGAGAGAAATGATGCTGTAATGGTAAGGCCTCGGTTAAATCAACAAGCTTATAATAATAATTATTACAACGGGGGGTCATCAAGCCCGTTGACGGCGGTTGTGGCGGCGAGAATGGATGAGAAAGCGTCGGCGATGGTGTCGATGTCGGCGCGTGAGAGAGAAAGCAATTCGGCGAGAGAGGAGCAAAGGAGCTATTTTGCAGAAATGGCAGATGAGAACAGTCCACGGCCACCTTATCCATTTTCACTGTTGGAAGGTGGCTTCTAG 1011 0.4807 MVSDPSTDALITWGRANNSFIVFDPLDFSRMILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLREQKHLLKNIVRRKQSRSSSYLSLFQGKNNEEVEDEVLMMEIARLKEEQKSLDEELQGMNKRLETTEKRPQQMMAFLYKVVEDPEVLSRILLEKKQKQLGEKRRRLISSSPSSSSGMATVKMEFEEEEAASLGGAIISSPSPETTTIGFEFGRYSQASPPPTEETVISGTDTSSGWWSERNDAVMVRPRLNQQAYNNNYYNGGSSSPLTAVVAARMDEKASAMVSMSARERESNSAREEQRSYFAEMADENSPRPPYPFSLLEGGF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0761 336 FunFam Heat stress transcription factor B-4 1 84 - -
Lele47g0761 336 Gene3D - 1 84 IPR036388 -
Lele47g0761 336 SUPERFAMILY "Winged helix" DNA-binding domain 1 83 IPR036390 -
Lele47g0761 336 SMART hsfneu3 1 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g0761 336 PRINTS Heat shock factor (HSF) domain signature 32 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g0761 336 PRINTS Heat shock factor (HSF) domain signature 45 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g0761 336 Coils Coil 98 139 - -
Lele47g0761 336 ProSitePatterns HSF-type DNA-binding domain signature. 33 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g0761 336 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 211 IPR027725 -
Lele47g0761 336 Pfam HSF-type DNA-binding 1 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g0761 336 MobiDBLite consensus disorder prediction 224 244 - -
Lele47g0761 336 MobiDBLite consensus disorder prediction 295 336 - -
Lele47g0761 336 MobiDBLite consensus disorder prediction 301 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0761 Lele-ChrLele47 13930757 13931896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0761 1 176 HSF AT4G17750 47.596 2.15e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele47g0761 HSF_DNA-bind 1e-26 CL0123