Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0752 ATGTTCATGACTGATTTCAGCCTAATTTTTTCATTATTGCCAGTTGATCCATATGGTGGCCCACAGCATCAATGGCAGCACAATGCTCCCCCTCCTTCAGATCTTGTGGTTTCAGTAATGCCAAAGCCATCGCCCCCTCCACCACCAGTTGCATCACGGCCTGCCCACTCACCAGTTTATGCTCAACCTCCACCGCCACCGCCACCTTTCATAAGCAGCAGTGGTGGGTCTGGCTCTAACTATTCAGGTGGTGAAAACATTCTTCCATCTCCCTCTCCTGGCTTTGCACTGGGTTTCTCAAAGAGTACATTTACATATGAGGAGCTGGCCCGGGCAACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCGAATGGAAAGGAAGTGGCTGTGAAGCAGCTTAAGGCTGGAAGTGGGCAGGGGGAGCGCGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAGCATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTCGTTTATGAATTTGTTCCCAACAATACGTTGGAGTTTCACTTGCATGCAGAAACTGATCATCTCAATTTTAATGTTAATTGCAATATCTGTGTGTGCAGTTACCTGGCACCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTCGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCGAGCCATACATTTATGGAGGATGGTTTGGTAGACTGGGCAAGGCCTATGCTCACTCGTGCATTGGAAGATGAAAATTTTGATTCCGTGGTTGATCCAAGACTCCAACATGAATATGACCCCCATGAGATGGCTCGTATGGTGGCATGCACTGCAGCTTGCATACGACATTCGGCAAAGCGCAGGCCAAGGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTGTCTCTTGCAGACCTTAATGAAGGAATTAAACCCGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCAGATTATGACGCAGTTCAATACAAGGAGGACATGAAAAAGTTCAGGAAAATGGCATTTGGAGGAGGAACAAACGAGTATGGTGCGAGTAACGAATACAGCGGACCGCCTACAAGTGAGTATGGCTTGTACCCGTCTGGCTCAAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAACAGCCAAGATGTGACTGAAAACAATATCTCCAAGAGAGCATGGAGTTGGAAAGAAGAGTGCAGTGCCAAATTGGTTCTTGGTCCTAGTCAGAGACCACTACATATTAGTCAATATGGTGAATCTCGAATAGCGGTAACCTAA 1404 0.4708 MFMTDFSLIFSLLPVDPYGGPQHQWQHNAPPPSDLVVSVMPKPSPPPPPVASRPAHSPVYAQPPPPPPPFISSSGGSGSNYSGGENILPSPSPGFALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHAETDHLNFNVNCNICVCSYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFMEDGLVDWARPMLTRALEDENFDSVVDPRLQHEYDPHEMARMVACTAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDAVQYKEDMKKFRKMAFGGGTNEYGASNEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMNSQDVTENNISKRAWSWKEECSAKLVLGPSQRPLHISQYGESRIAVT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0752 467 Gene3D Phosphorylase Kinase; domain 1 95 191 - -
Lele47g0752 467 MobiDBLite consensus disorder prediction 382 410 - -
Lele47g0752 467 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lele47g0752 467 MobiDBLite consensus disorder prediction 73 87 - -
Lele47g0752 467 ProSiteProfiles Protein kinase domain profile. 116 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0752 467 Pfam Protein tyrosine and serine/threonine kinase 219 328 IPR001245 GO:0004672|GO:0006468
Lele47g0752 467 Pfam Protein tyrosine and serine/threonine kinase 121 217 IPR001245 GO:0004672|GO:0006468
Lele47g0752 467 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 79 216 - -
Lele47g0752 467 SUPERFAMILY Protein kinase-like (PK-like) 92 328 IPR011009 -
Lele47g0752 467 MobiDBLite consensus disorder prediction 382 426 - -
Lele47g0752 467 FunFam proline-rich receptor-like protein kinase PERK1 94 191 - -
Lele47g0752 467 Gene3D Transferase(Phosphotransferase) domain 1 195 339 - -
Lele47g0752 467 MobiDBLite consensus disorder prediction 36 72 - -
Lele47g0752 467 MobiDBLite consensus disorder prediction 23 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0752 Lele-ChrLele47 13845729 13848788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0752 59 411 Trihelix Transcription Factor Family AT4G32710 41.766 3.58e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele47g0752 PK_Tyr_Ser-Thr 3.7e-10 CL0016