Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0747 ATGTATAGATCATTCATGACATGTGATGATCCAAAAGGAGTCGTGGAATGCGGGGCAATCAGAAAGTCCAGGGCTGGATCACAGAAGATGAAGGACAAGATGAAAAGTCACCGGAGGACGACGGCTGAGAAACCTGAAGCATCTTTGTCAATAAGATCAGACAGAGAAGAAATGGTCCCGAAAGGATCCACACAAAGTCCTGTCGATCCATGTTCCTTGCAGCTTATGGAGGTCTCGAGAGGGGCTCAAAGGTTGAACACCATGATTGATACATGGTCTAGGCATATGAGATATGATGGAAGGTCTGGAGATATTGCAAAAGATTTATTGAAAGGAGCTCTTGATCTCCAAGAATCTCTAGTCTTGCTTCGAAAGTTGCAAGAAGCTTCGCAGCACAAGTCCTGTTTGAAGAAAAACCAGAATGAAAAACCTGAAAGAGGAAGAACTGATGCAAAGATGATGTGTGGAACATACACTAACAACCAATTTAGTGAACAAAGTTATCCAATGGGATTTGAAAGACCTCGCCCTTCTGCTGATGGTTCTTCAAGAAATTGCACAGAGGATCTTAAGAAAGTGATCAAAGACAGCCTGATTAAGCAAAATCTGTTTACTATGCCAAGTTCTGAAGGATTAGATTCAGCATCTGAAATTCCCTCAACAAGCTCAAGCCAATCTTCTGGGGTTAATACTGATAGGCTTTCTGATTCATCTTTTTCATCTGGCACTTCAAAGGTGAGAGGAACCAATCTAGTTGCCAAGCTAATGGGTTTAGAAGAATCCCCCTCAAGACCATTTCCAGCTGCTGCACATAAACAGTTGCAGGGTGAAAAGGTTCTGAATCAAAAGAGACCTACATTTGAGATAGATATCCCCAAGTTGAAAAAGGCTAGTTCTATAATTGAGAAGGTTGATCCGGAACGAAAGAAGACCCTCAGTGAAATTCTTGAGACTATTCAGTTCAAAGGACTATTGAAGAAGAGTTCTGTCCTTGAGCCTAATCTTCGGATTCGTCATCCTGATGATTCCCATCCCAAACAATGTAATAATTTACCGCCGATTGTACTCATGAAACCTCGATATAGTTCATACCAGGAATCAGCTAAATCCCATGCATTTGTTCCTCCAGATCCAGAAGGTCTATCCCTTAGAATACCAAAAGCAGAGGTAGTCCCTTCCAAATCATTCAAACAAAAAGGATCCACCAGCATGGGGAGCAGAGCAGAAGATGTTACCAAAAGGCTTACACGTGAGGGGAAGCCTAAAATCCTCAAAGAGTTTGTGAAGCTGGATGAGAAAGCAATCATACCTATTGAAAAGTCTCCAAATATGGTGAAATCATATAGTCATATAAGTCATAAACCACACGTACAGGAGGCAATTGAGAAAAAAGCTAAGGTGAAAACTGTTACCAGAAAGCTGCCAGAAAAGGAGGTCTCAAGACATAAAATTTTGACAAGGTCCCAAGATCGAGAAGACATTACCTCCATAAAGTTTAGGACACCAACAAGTGAATTGACCATAATCAAGAATGAGATTCCCTCCCAGCAGAGCACAGCTTTGATCATCAGCCCGAAAACAAAAACAATAAAGCATAAGAATTTCAAACCGAGAAAGAATCAGAATAATAGCCAGAAGCTTATTCCAGAGCCTGAAGCAGCTAAACCAATTGATGAACAATCAGTAAGCGAAGAAGAGAAGAGAATTGTTGTTCCTTGTGAAGATGATTTCACTGAGATTAGAACTATAGCTGAACATGCAGTTGAATTTCCAGTGGAACATGAAGTAGATGCCTCCACGAGTAAGTTGAATGAAGATTGTTCTCAGAGCCCGAACTCTTCACGTGATGTTACACCGCTAAAGGTTGAACACGAAATTGATGCCACTTCTACTGAAGAAGCTCATGATGTGAACAATGGAGGGGAGACAGATAGCAAGATTAACCAAGAAGGGGCTGAGCTGAAATATTTTCTTTTAACCAACCCATTATTTGTTGGCCATGCAGAGGAGCTCCTGAATCTTGATGGGGATTGTCTCATGACCCTGCAAAAATATGAAACCAATGGGATAGCGAATCCCAGACTCTATTTGGATTGTGCAAATGAACTCACTGAGCGTAAAAGCCTGCACGATTCACAAATGGTTCATCCAATGTTGCTAACTCGGACAGGGAACTCGAGATTACAGATCTCTTTAGGCAGGTTGGTTGAAGAAATTTACAATGCCATTGAGAAGCTGAAGTTTTACACTATGATCTCCGGGGAGAAATTCTCTGTAGATAATCTCTATGCAATGATGAGAAGTGATATAAAGTGCCATGGGCTGATAAATGGAATATGGGACTGGGGTTGGAGGTATGGATTTTCTGCAGATGAATGTGAGCAAGTTGTCAACGAAGTAGAGAGCCTAGTTTTAAGTGATTTGATTGAGGAGCTTATTGTAGATTTATGA 2451 0.4113 MYRSFMTCDDPKGVVECGAIRKSRAGSQKMKDKMKSHRRTTAEKPEASLSIRSDREEMVPKGSTQSPVDPCSLQLMEVSRGAQRLNTMIDTWSRHMRYDGRSGDIAKDLLKGALDLQESLVLLRKLQEASQHKSCLKKNQNEKPERGRTDAKMMCGTYTNNQFSEQSYPMGFERPRPSADGSSRNCTEDLKKVIKDSLIKQNLFTMPSSEGLDSASEIPSTSSSQSSGVNTDRLSDSSFSSGTSKVRGTNLVAKLMGLEESPSRPFPAAAHKQLQGEKVLNQKRPTFEIDIPKLKKASSIIEKVDPERKKTLSEILETIQFKGLLKKSSVLEPNLRIRHPDDSHPKQCNNLPPIVLMKPRYSSYQESAKSHAFVPPDPEGLSLRIPKAEVVPSKSFKQKGSTSMGSRAEDVTKRLTREGKPKILKEFVKLDEKAIIPIEKSPNMVKSYSHISHKPHVQEAIEKKAKVKTVTRKLPEKEVSRHKILTRSQDREDITSIKFRTPTSELTIIKNEIPSQQSTALIISPKTKTIKHKNFKPRKNQNNSQKLIPEPEAAKPIDEQSVSEEEKRIVVPCEDDFTEIRTIAEHAVEFPVEHEVDASTSKLNEDCSQSPNSSRDVTPLKVEHEIDATSTEEAHDVNNGGETDSKINQEGAELKYFLLTNPLFVGHAEELLNLDGDCLMTLQKYETNGIANPRLYLDCANELTERKSLHDSQMVHPMLLTRTGNSRLQISLGRLVEEIYNAIEKLKFYTMISGEKFSVDNLYAMMRSDIKCHGLINGIWDWGWRYGFSADECEQVVNEVESLVLSDLIEELIVDL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0747 816 MobiDBLite consensus disorder prediction 25 59 - -
Lele47g0747 816 Pfam Domain of unknown function (DUF4378) 688 811 IPR025486 -
Lele47g0747 816 PANTHER OS01G0228800 PROTEIN-RELATED 1 816 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 208 245 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 597 620 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 535 567 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 602 617 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 162 186 - -
Lele47g0747 816 MobiDBLite consensus disorder prediction 23 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0747 Lele-ChrLele47 13799178 13802013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0747 654 813 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 29.762 6.40e-17 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0645 45 5379464 5382289 Lele47g0747 47 13799178 13802013 hybridization
Lele46g0690 46 5111882 5115968 Lele47g0747 47 13799178 13802013 hybridization