Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0743 ATGGGGGAAGGTGAGGGGGGAGATTGCCCTCCGAAGAATGTGTCAGCGGATGCTACAGGAGCAGCGTTGCCGTCGGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACGGGTTATAGTGGTGCGGCCTTGCCTGAACACCCCCAGCCGCAGCTGCAGCCTCAGTCGCGGACGGTGGTGCAGAGTCAGCAGCAGCCACGCCCAGTTACAACGCAACCGGTTGTTGTGATGCCTATGCCACCGCAGGCTCCTCATTCTTCAGCGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCCAACTTTGATATGAAGGATGTTACTCCTAAGAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGTGAACTTTTAATACTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGCGAGTGCTTTCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTGTTCCATGGAGATCAGAATAATAGCATGGCATATATCCAGCAGGCAGCAAATGCTGCTATAACAGGGGCAATTGGATCTTCTGGTTATGCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGGCCAACAACCAAGGATACGTCTGTAGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAGAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCCTGGTGCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTGATGGAAAAGAATGCAGAAGATCAAGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCGAACCAAACGGATAAAATCAGTCCAGATAATTCTAGTTCAGATGGGGCTGATGCCCCCAAAAGCAGGCCCATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACTATGTTCATGACAGCTCCATCCCCTAATGGTTCAATGGATCATGCTTGCAATACGTCTTTACGCTCTCGTTACGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGACTCAGAAGGAGGTAATCAACAATGGCAGTGGAAATGCTGGTGCTGAAACGGCGCATCAGCTGGGAGCCACCAGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGATGGCCTCTAGTATGAACATGATTGCTTCAGAGGGTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAGCCTAAGATTGAAAAGGAGATGTGA 1782 0.4624 MGEGEGGDCPPKNVSADATGAALPSDVPAKKLARQLDFTGYSGAALPEHPQPQLQPQSRTVVQSQQQPRPVTTQPVVVMPMPPQAPHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGELLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNSMAYIQQAANAAITGAIGSSGYASPPVSKKRKGQELFFGPTTKDTSVGRLGQFQQANHIRSPAPSSSLSPVPGARVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNAEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMDHACNTSLRSRYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELETQKEVINNGSGNAGAETAHQLGATSNGVVNAVVPPMMASSMNMIASEGPGNLVPENGESKPKIEKEM 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0743 593 MobiDBLite consensus disorder prediction 573 593 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 94 111 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 386 400 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 383 446 - -
Lele47g0743 593 PANTHER TESMIN/TSO1-RELATED 47 511 IPR028307 -
Lele47g0743 593 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Lele47g0743 593 Coils Coil 149 169 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 51 73 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 41 111 - -
Lele47g0743 593 MobiDBLite consensus disorder prediction 414 436 - -
Lele47g0743 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Lele47g0743 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Lele47g0743 593 MobiDBLite consensus disorder prediction 1 26 - -
Lele47g0743 593 SMART CXC_2 114 154 IPR033467 -
Lele47g0743 593 SMART CXC_2 199 240 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0743 Lele-ChrLele47 13741952 13762305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0743 1 526 CPP Transcription Factor Family AT4G29000 57.706 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele47g0743 TCR 3.1e-12 No_clan