Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0737 ATGAATAGAGGCGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGGCCGCCGGAAACCCTAATTGGTGGAACATAAATCATACGATGAGGCCTCCTATTTCTCATCATCATCAGCAACAACCACCTACTTCTAATTCTGCTTCTTCTCCTTTCTTCTTCTCATCATCATCAACTAACTTCCTCTCTCCTAATTATCCACCATCTTCTTCTCTTCCTTTTCCTTCTACCTGGCATGAAATTCCAGATCACCTTCCTCAGTCCTGGAGCCAACTTCTCTTGGGTGAAGAAGATAAGAAAATGGGGAGCTGGGAGGAGCAAGTGCTGATGAGTCAGGCTCAAAATGTTGGTCTTATAGATGTCAAGCAAGAGACCTCATCGGTGAACAGTTACGTGTATGGAGGAGGACATGGCGGTGGCGGTGGCGATGCTAGTGGCGGCAATAACAGTAGCGAAGAGTTTCAGGCGGCTTCCGCCTGTGGTGGTGGTGGTGGTGGTGCTAATTGGTCTCATCAAATAGTGCCTCCTCCTACTCCTCATCCTGCTGCTGCTGCTTCATCTTCTTCACCAAAATCATGTGTCACAAGTTTCAGCAGCAACATGTTAGATTTCTCTAGCTCTAAGAAAGATGCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGTGGTGGTGGGCCAGTGAAGAAAGCTAGGATTCAACCATCAACGACGACACAGACACAGTCAAGCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACTGCCCTTCATCAGCTTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATACATCAGATTCCTCCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACTACTTCTGGATCATCTTCTTCAAACAAGAGGCACCAACACTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACTCTGGTCAGGAGTTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTTCCAGCTTCATGCACACTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCTGCTCTTGGAGGAGGAGGCTTTCGATAA 1128 0.4654 MNRGVVQSSPVQQMMAAGNPNWWNINHTMRPPISHHHQQQPPTSNSASSPFFFSSSSTNFLSPNYPPSSSLPFPSTWHEIPDHLPQSWSQLLLGEEDKKMGSWEEQVLMSQAQNVGLIDVKQETSSVNSYVYGGGHGGGGGDASGGNNSSEEFQAASACGGGGGGANWSHQIVPPPTPHPAAAASSSSPKSCVTSFSSNMLDFSSSKKDARHPPPDRSSECNSNGGGGPVKKARIQPSTTTQTQSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTTSGSSSSNKRHQHSVQGEKNCIFPEDSGQELEEEPKKDLKSRGLCLVPASCTLQVGSDNGADYWAPALGGGGFR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0737 375 CDD bHLH_AtbHLH_like 246 295 IPR045239 -
Lele47g0737 375 Gene3D - 247 297 IPR036638 GO:0046983
Lele47g0737 375 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 356 - -
Lele47g0737 375 MobiDBLite consensus disorder prediction 26 50 - -
Lele47g0737 375 MobiDBLite consensus disorder prediction 203 249 - -
Lele47g0737 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 248 298 IPR036638 GO:0046983
Lele47g0737 375 MobiDBLite consensus disorder prediction 301 320 - -
Lele47g0737 375 MobiDBLite consensus disorder prediction 141 189 - -
Lele47g0737 375 MobiDBLite consensus disorder prediction 234 248 - -
Lele47g0737 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 238 287 IPR011598 GO:0046983
Lele47g0737 375 FunFam transcription factor bHLH68 isoform X1 245 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0737 Lele-ChrLele47 13641494 13646066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0737 1 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.153 4.90e-67 214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0655 45 5491298 5495405 Lele47g0737 47 13641494 13646066 hybridization
Lele46g0708 46 5250981 5254744 Lele47g0737 47 13641494 13646066 hybridization