Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0734 ATGTCTGTTCCTGAGCAAGACTATGTAAGCTTATCAGAGACTTCAACTCCATCAATGGAAAGCTCAGACAAGTTCTCTCAGAGAAGAAACGGTTTGAATCTCAAGGCAACTGAACTACGGCTCGGGTTACCCGGGTCGGAGTTGCCCGAGATGGATTCGGATTCGGAGGATAAGAACGAGTATCCATTAGGCATACTCAAGAGTCTCATGTCTGGGGCCAAGAGGGGCTTCTCAGACGCCATTGATGGCGGTTCTGGGAAGTGGTTTCTCTCCGGCAAAGCTGGTTCTGATTTGGGTTTGGGTAAAGATTGTAGCTTGTTCTCTCATAGAGGTGCTAACTCTGGCAAGACCCCTGTCGGGTCGGATTCCGGCAAACATCAAGCGGGTTTGGGTCCCTCCGCTGTGAAAGATAGTATTCCTCAGCCAACAAAGCATTTGCATGAGAAAAAGTCTCAGTTTCCTGCTCCTTCTTCAAAAATTACTACTACAAAAAGTGACTTGTTGTTATATGATGTGAGAATCAGGGGACAAGTTGTGGGATGGCCACCAATCCGATCATTTCGGAAGAACTCGATGGCTCCTCAGCCTCAAAAGAATGGTGATGATGCAGAATCAGGTGACAAGAGTGGATGTCAATGCGGCTCTCATGGGGCTTCGTGTCGGCATAATATGAGTGAGAGTAGATTGATCGATCTGCTTAATGGTTCAGAATATGTGCTCACTTATGAAGACAAGGATGGTGATTGGATGCTAGTTGAAGTTCCTCTAAGTCTCCCATCTGACTTTCCTGGTAGACTTGTTTTCGCCGAGAGCGATGGAGAAGTGCAAAAGTCGGAACTAGGGGAATGTGAAATCAATCAGATTGAAGGATATAATGATAAATATACAAAAGAGGTGGGTTTTATGCAAGTGGTGGAAGTGGGAGAGGCTAAAATGGTTTCTGTGTGA 948 0.4589 MSVPEQDYVSLSETSTPSMESSDKFSQRRNGLNLKATELRLGLPGSELPEMDSDSEDKNEYPLGILKSLMSGAKRGFSDAIDGGSGKWFLSGKAGSDLGLGKDCSLFSHRGANSGKTPVGSDSGKHQAGLGPSAVKDSIPQPTKHLHEKKSQFPAPSSKITTTKSDLLLYDVRIRGQVVGWPPIRSFRKNSMAPQPQKNGDDAESGDKSGCQCGSHGASCRHNMSESRLIDLLNGSEYVLTYEDKDGDWMLVEVPLSLPSDFPGRLVFAESDGEVQKSELGECEINQIEGYNDKYTKEVGFMQVVEVGEAKMVSV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0734 315 MobiDBLite consensus disorder prediction 186 220 - -
Lele47g0734 315 MobiDBLite consensus disorder prediction 113 159 - -
Lele47g0734 315 MobiDBLite consensus disorder prediction 1 33 - -
Lele47g0734 315 Pfam AUX/IAA family 211 252 IPR033389 -
Lele47g0734 315 Pfam AUX/IAA family 37 205 IPR033389 -
Lele47g0734 315 MobiDBLite consensus disorder prediction 1 59 - -
Lele47g0734 315 Gene3D - 203 271 - -
Lele47g0734 315 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 203 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0734 Lele-ChrLele47 13561690 13564721 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele47g0734 AUX_IAA 3.4e-14 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0658 45 5549691 5552676 Lele47g0734 47 13561690 13564721 hybridization
Lele46g0710 46 5296663 5299505 Lele47g0734 47 13561690 13564721 hybridization