Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele47g0721 | ATGTCTTCAAGGAGTGTGTCCCAAGCAACCAGAGCTGCTACAACAGAAGACGTTCTAGAGTGGGTCAAACAGGACAAACGAAGAATGCTTCATGCTGTATATCGTGTTGGGGATTTGGACAGGACCATCAAATTTTATACTGAGTGCTTGGGAATGAAGCTCCTGAGAAAACGTGATGTACCAGAGGATAGATACACTAACGCATTTCTTGGATTTGGGCCAGAAGATGCACACTTCGTTATTGAACTGACATACAATTATGGGGTTGATGCATATGACATTGGAAATGGATTTGGCCATTTTGGCATTGCTGTTGATGATGTTGAAAAGACTGTAGAACTCATCAAAGCTAAGGGTGGCAAAATAACTAGAGAGCATGGTCCTGTTGAGGGAGGCAGCACGATAATTGCTTTCATTGAAGATCCAGATGGATATAAATTTGAGCTTTTGCAAAGAGGTCCCTCTCCCGAGCCTTTGTGCCAAGTAATGCTTCGAGTTCGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCTTTTGGTATGGAGCTTCTTCGTACACGAGATAATCCCAAGGAAAAGTATACCATCGCAATGTTAGGTTATGGTCCTGAAGATAAAAGTGCTGTTTTGGAATTGACTTACAATTATGGAGTCTCTGAATATGATAAAGGAAATGGTTATGTTCAGATTGCAATAGGTACAGATGATGTGTACAGTACTGCCGAAGCTATTAAACTTGTTGGAGGAAAGATTACTCGGGAACCTGGACCGTTACCTGGCATCAACACAAAAATAACAGCATGCTTAGATCCTGATGGTTGGAAGACGATAATTAGTGCTGGTATTCCTGCTCAAGAAACGACTGAAGAGGACATAAATCTGGAACCAGCTCCATGCTGGGAGTAG | 909 | 0.418 | MSSRSVSQATRAATTEDVLEWVKQDKRRMLHAVYRVGDLDRTIKFYTECLGMKLLRKRDVPEDRYTNAFLGFGPEDAHFVIELTYNYGVDAYDIGNGFGHFGIAVDDVEKTVELIKAKGGKITREHGPVEGGSTIIAFIEDPDGYKFELLQRGPSPEPLCQVMLRVRDLNRSIEFYEKAFGMELLRTRDNPKEKYTIAMLGYGPEDKSAVLELTYNYGVSEYDKGNGYVQIAIGTDDVYSTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTIISAGIPAQETTEEDINLEPAPCWE | 302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele47g0721 | 302 | ProSitePatterns | Glyoxalase I signature 2. | 95 | 107 | IPR018146 | GO:0004462|GO:0046872 | |
| Lele47g0721 | 302 | Gene3D | - | 155 | 281 | IPR029068 | - | |
| Lele47g0721 | 302 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 28 | 152 | IPR037523 | - | |
| Lele47g0721 | 302 | FunFam | Lactoylglutathione lyase | 155 | 284 | - | - | |
| Lele47g0721 | 302 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 161 | 276 | IPR004360 | - | |
| Lele47g0721 | 302 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 29 | 149 | IPR004360 | - | |
| Lele47g0721 | 302 | Gene3D | - | 2 | 153 | IPR029068 | - | |
| Lele47g0721 | 302 | PANTHER | LACTOYLGLUTATHIONE LYASE | 8 | 279 | - | - | |
| Lele47g0721 | 302 | FunFam | Lactoylglutathione lyase | 25 | 154 | - | - | |
| Lele47g0721 | 302 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 159 | 283 | IPR029068 | - | |
| Lele47g0721 | 302 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 158 | 282 | IPR037523 | - | |
| Lele47g0721 | 302 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 27 | 157 | IPR029068 | - | |
| Lele47g0721 | 302 | CDD | GlxI_Ni | 29 | 150 | - | - | |
| Lele47g0721 | 302 | TIGRFAM | glyox_I: lactoylglutathione lyase | 159 | 277 | IPR004361 | GO:0004462|GO:0046872 | |
| Lele47g0721 | 302 | TIGRFAM | glyox_I: lactoylglutathione lyase | 15 | 161 | IPR004361 | GO:0004462|GO:0046872 | |
| Lele47g0721 | 302 | ProSitePatterns | Glyoxalase I signature 1. | 161 | 182 | IPR018146 | GO:0004462|GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele47g0721 | Lele-ChrLele47 | 13250603 | 13253748 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele47g0721 | 161 | 275 | Calmodulin-binding Proteins | AT1G08110 | 27.857 | 1.23e-10 | 58.9 |