Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele47g0717 | ATGGAACGGATCGTCGGCGGCAAGTACAAACTCGGACGCAAGATCGGGAGCGGATCCTTTGGCGAAATTTACCTTGCAACTCATATCGATACTTTTGAAATAGTCGCGGTCAAAATTGAGCACACTAAAACTAAGCATCCACAACTGATTTATGAGGCAAAACTGTATCATGTTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAGGTGGTCTGGTATAGACGGGGAGGACAATGTGCTAGTTATTGATTTGCTGGGACCCAGTCTTGAAGATCTGTTTGTGTATTGTCGAAGAAAGTTTTCGTTGAAGACTGTATTAATGTTGGCTGATCAGATGATCACTAGAATAGAATATATTCATTCTAAGGGTTTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCCAATCAGGTTTACATAATTGACTTTGGGCTTGCCAAACGATATCGGGATCCCACAACCAATCGTCATATTCCTTACCGGGAGAAGAAAAACTTAACAGGCACTGCACGTTATGCAAGCTGTAATACTCACCTTGGTATTGAGCAAAGCCGCCGGGATGATTTGGAGTCACTAGGATATGTGCTTTTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAGCCAAATCTCATCCTGTAGAGTTTGCTTCGTACTTTCATTATTGCCACTCTTTGACGTTTGACCAGCGACCTGATTATGGATTTTTGAAGAGTCTATTCCGGGACCTATTTTCTCAACAAGGTTTTGAATTTGATTATGTATTTGATTGGACAATCTTAAAGTACCAGCAGACGCAGAAGATTAAAGTTCAGCCTCACACATCTCCAGCTCCTAGAGCGAACAACAGTCATGAAAGGCCAACGGGTGTTGACAATTCTCATGGTGTTTATACTTATTCAGGGGATGTCTCGGAGCACATTAGATCTGGAAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAATCACCAGCAGGAAAAAATCTAGGTGTTAGTAATCCTCTTGACAAGAATATTTTTGAAGAAGCAAATATGCCTTCTACTTCATATTCACATGCTGGTACCTCGAAAAGAAACTCCTTGAAGCCTGCCATGACCACTGAATCTGCAAACCCCGGTCATGGCCAAGGCAGTAAAATTGGTCCTTCAAGTAGCCGGATTTCATCTCTGCAACGGATATCTTCTTCCAAATGA | 1293 | 0.4153 | MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIEHTKTKHPQLIYEAKLYHVLQGGSGIPSIRWSGIDGEDNVLVIDLLGPSLEDLFVYCRRKFSLKTVLMLADQMITRIEYIHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDPTTNRHIPYREKKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLAKSHPVEFASYFHYCHSLTFDQRPDYGFLKSLFRDLFSQQGFEFDYVFDWTILKYQQTQKIKVQPHTSPAPRANNSHERPTGVDNSHGVYTYSGDVSEHIRSGNATGSGVKMQFKSPAGKNLGVSNPLDKNIFEEANMPSTSYSHAGTSKRNSLKPAMTTESANPGHGQGSKIGPSSSRISSLQRISSSK | 430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele47g0717 | 430 | FunFam | Casein kinase I isoform delta-like | 1 | 339 | - | - | |
| Lele47g0717 | 430 | MobiDBLite | consensus disorder prediction | 303 | 351 | - | - | |
| Lele47g0717 | 430 | SMART | serkin_6 | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele47g0717 | 430 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
| Lele47g0717 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 328 | - | - | |
| Lele47g0717 | 430 | ProSiteProfiles | Protein kinase domain profile. | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele47g0717 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele47g0717 | 430 | Pfam | Protein kinase domain | 9 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele47g0717 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 290 | IPR011009 | - | |
| Lele47g0717 | 430 | PANTHER | CASEIN KINASE-RELATED | 7 | 336 | - | - | |
| Lele47g0717 | 430 | MobiDBLite | consensus disorder prediction | 303 | 366 | - | - | |
| Lele47g0717 | 430 | MobiDBLite | consensus disorder prediction | 379 | 430 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele47g0717 | Lele-ChrLele47 | 13208606 | 13212347 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele47g0717 | 9 | 215 | EF-hand Containing Proteins | AT4G23650 | 29.577 | 3.59e-14 | 72.4 |
Transcription factors information