Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0708 ATGTCTGAGTGCAACTTGATCGGCGAAATCCCGGAAAGTATTGAGAAACTGGTGGATTTGGAGATGTTGGATTTATCCATAAATCAGATAAGTGGGAAAATTCCAAGTGGTATATTTCTGCTGAAGAATCTAAGCATAATGTTTCTTTCAAGGAATCAGCTTAATGGTGAGATAACTCAAGTGATTGAAGCCTTAAACTTGACGATCGTCGATCTTGCTCGAAACAAGCTTACAGGGAAGATACCTAGTGGCTTTGGAAATCTCCATAATCTAACTGGTTTGAACTTTGGTTTTAATCAATTATCAGGTGAGATTCCAGAAAGCTTAGGCCGTCTTCAATCTATAATAGATTTTGGCGTTATCGTCAACAATTTATCAGGTAATATTCCTTCAGAGTTTGGTCTTCATTCAAATCTCAGAAGATTTGAACTTGCATCAAACAGTTTCACTGGTAATCTTCCTCAGAACTTGTGTTACCATGGAAATTTATTTCGGTTAACAGCATACGACAACAAACTCAGTGGGGAATTACCGGAATCATTGGGAAATTGTCGCAGCTTGCTTGAGTTGAAGGTTTACAATAATGAGTTCTCTGGTGAAATTCCCAGCAAACTTTGGGAGTCTAAGAATTTGTCAACTTTCATGATCAATGACAATACGTTCACAGGTGAGCTTCCTGAAAATTTGCCTGTGAATGTTTCACTCATGGCAATTAGTTACAATCGGTTTTCAGGTCGAATTCCGAAAGGAATATCTTCCATGAAGAATCTGGTTGTGTTCAACGCAAGCAGCAACCTTTTTAATGGAAGTATTCCAATACAGCTAACCAGTCTTTCTCAGCTAGCTACTTTGTTGCTTGATCAGAACAAACTTTCCGGGACATTTCCATCTGAAATTCTATCATGGAAATCTCTAAGAACCCTAAACTTGAGCCAAAATCAACTCTCCGGAGAAATCCCGGATTCGATCGGTCGTCTGATTGACCTTGCGCAACTAGATCTGTCAGAAAACCAATTCTCTGGCAAAATCCCATCTCAACTAGCCCTTTTGACACCTTCTGTTCTCAACCTTTCATCTAATCATTTCACTGGGAAGATTCCTAGTGAATTCGAGAATCTTGCTTACGCCACAAGCTTCTTGAACAATTCTGGTCTTTGTTCTGATAATGCTGGATTAAACCTTAAATTCTGCAATTCTGTCCCTCGAAGCTCGAGCGATAAAGGCGGCTCATCGTCTATGTCTCTTGGTTTGATCATAGGCCTTGCTGTAGTAGCCTGCATAGCAATTTTCTTCTTGTCATTTTTGGTGATGAGATTCTACCAAAGGAGAAAGCAAGAATTGGACACTTCATGGAAGTTAACTTCATTCCAAAAGCTAAGCTTCACAGAATCAAAGATTGTCTCATCCATGACAGAGCATAACATCATAGGCCGAGGAGGGTATGGTACAGTGTACCGTATCGCCGTCAACGATAAAGACGACTACGTTGCCGTGAAGAAGATAAGCAATAACAGGAAGTTAGATCATAAACTTGAGAATGCATTTCTTGCAGAAGTTGAAATCTTGGGCACTATTCGTCACATTAACATAGTGAAGTTGCTATGTTGTATTTCTAATGACGATTCTCTACTTCTTGTTTATGAGTATTTGGAACATCGAAGTCTTGATAAGTGGCTGCACAAGAAGAATAATGGCTCATCAGGATTGTTATCATCTACAGTTCATAGTGTTGTTCTTGACTGGCAAAAGAGGTTGAGAATAGCCGTTGGGATCGCTCAAGAATATGCTCAAACGAAAAGAGTGAATGAAAAGGTTGATGTATATAGCTTTGGGGTGATCCTGCTGGAGCTGACAACAGGAAAGGAAGCTAACTATGGAGATGAATACTCGTCTCTCGCCGAATGGGCATGGCGTCAGATTCAACTAGGAAACAACATGGAACAAGTTCTAGACGAAGATGTTAAGGAAACTTGGAACTTAGATGACATGTGCAGTGTCTTCAAGCTTGGAGTGATGTGTACAAGCAAAGAGCCAGCTGGTAGGCCAACCATGAAGGAGGTTCTGAGCATATTGCTGCGCTTGAAAGAACCAGTTGGTTATGTAGAAATGATGAATTTTGGTCATTTTGAGGCTGTTCCTCTGCTAAAGAATTCTAAAAAAGAGAGTAGATTAGATATTGATAACGATAGCTAA 2193 0.399 MSECNLIGEIPESIEKLVDLEMLDLSINQISGKIPSGIFLLKNLSIMFLSRNQLNGEITQVIEALNLTIVDLARNKLTGKIPSGFGNLHNLTGLNFGFNQLSGEIPESLGRLQSIIDFGVIVNNLSGNIPSEFGLHSNLRRFELASNSFTGNLPQNLCYHGNLFRLTAYDNKLSGELPESLGNCRSLLELKVYNNEFSGEIPSKLWESKNLSTFMINDNTFTGELPENLPVNVSLMAISYNRFSGRIPKGISSMKNLVVFNASSNLFNGSIPIQLTSLSQLATLLLDQNKLSGTFPSEILSWKSLRTLNLSQNQLSGEIPDSIGRLIDLAQLDLSENQFSGKIPSQLALLTPSVLNLSSNHFTGKIPSEFENLAYATSFLNNSGLCSDNAGLNLKFCNSVPRSSSDKGGSSSMSLGLIIGLAVVACIAIFFLSFLVMRFYQRRKQELDTSWKLTSFQKLSFTESKIVSSMTEHNIIGRGGYGTVYRIAVNDKDDYVAVKKISNNRKLDHKLENAFLAEVEILGTIRHINIVKLLCCISNDDSLLLVYEYLEHRSLDKWLHKKNNGSSGLLSSTVHSVVLDWQKRLRIAVGIAQEYAQTKRVNEKVDVYSFGVILLELTTGKEANYGDEYSSLAEWAWRQIQLGNNMEQVLDEDVKETWNLDDMCSVFKLGVMCTSKEPAGRPTMKEVLSILLRLKEPVGYVEMMNFGHFEAVPLLKNSKKESRLDIDNDS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0708 730 ProSiteProfiles Leucine-rich repeat profile. 19 41 IPR001611 GO:0005515
Lele47g0708 730 ProSitePatterns Protein kinases ATP-binding region signature. 476 500 IPR017441 GO:0005524
Lele47g0708 730 ProSiteProfiles Leucine-rich repeat profile. 304 326 IPR001611 GO:0005515
Lele47g0708 730 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515
Lele47g0708 730 FunFam Receptor-like protein kinase HSL1 450 549 - -
Lele47g0708 730 SUPERFAMILY L domain-like 233 378 - -
Lele47g0708 730 Pfam Protein tyrosine and serine/threonine kinase 591 690 IPR001245 GO:0004672|GO:0006468
Lele47g0708 730 Gene3D Transferase(Phosphotransferase) domain 1 454 593 - -
Lele47g0708 730 SMART LRR_typ_2 278 302 IPR003591 -
Lele47g0708 730 SMART LRR_typ_2 17 41 IPR003591 -
Lele47g0708 730 SMART LRR_typ_2 303 326 IPR003591 -
Lele47g0708 730 SMART LRR_typ_2 88 112 IPR003591 -
Lele47g0708 730 ProSiteProfiles Protein kinase domain profile. 470 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0708 730 SUPERFAMILY L domain-like 2 229 - -
Lele47g0708 730 Pfam Leucine Rich Repeat 354 373 IPR001611 GO:0005515
Lele47g0708 730 Gene3D Ribonuclease Inhibitor 1 120 IPR032675 -
Lele47g0708 730 SUPERFAMILY Protein kinase-like (PK-like) 468 698 IPR011009 -
Lele47g0708 730 FunFam Leucine-rich repeat receptor-like protein kinase TDR 116 399 - -
Lele47g0708 730 Gene3D Ribonuclease Inhibitor 122 398 IPR032675 -
Lele47g0708 730 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 83 - -
Lele47g0708 730 Pfam Protein kinase domain 472 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0708 730 Gene3D Transferase(Phosphotransferase) domain 1 594 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0708 Lele-ChrLele47 13037352 13040202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0708 1 691 Receptor kinase-like Gene Family AT5G25930 46.941 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele47g0708 PK_Tyr_Ser-Thr 6.5e-06 CL0016