Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0707 ATGCCGCGTCTCTTTTACTTCTTCTTCTTCATTGTCCTGAGTGATGCTCAGACTCAGTCTCATTTGTATGATCAAGAACATGCAATCCTACTTAACATAAAACAACACTTTCATCCATTCCTCAATCAGTGGGCCCCATTGAATTCCTCCCATTGTTCTTGGCCTGGGATCATTTGCACAGATAACTCTGTCACTAAACTAGATTTTGGTGACTTGAACATCACCAAAACGATGCCTCCTTTCATCTGTGACCTCAAAAATCTCACCTTTATTGATTTTCAGTTTAATTACTTTTCTGGGGAGTTTCCAAAATTTCTATATAACTGCTCCAAGCTTGAGCATCTCGACCTGTCTCAGAACAGCTTTGTGGGTCCGATTCCAAAAGACATCGACCGATTGGCCAACCTGCGTTTTCTTAGTCTGGGTGGAAACTATTTCTCCGGCGAAATTCCGGCAAGCATAGGAAGGTTGAAGGAGCTGAGAAATCTTCAACTTTACTGGTGTCAATTTAACGTCAGTATCCCAGATGAAATTAGCGACTTGTCCAGTCTTGAATTCTTACACCTGGGTAACAACACCGATCTTCCTCCTACCCAGTTCCCGTTGAGCTTCACCAAGTTGAAGAAATTGAAGACCCTTTGGATGTTCTCGATGAATTTGATCGGGAAAATTCCAGAAAGTATTGTAGAAATGGTGAGTTTGGAGCAATTGGATTTATCGCAGAATAGCTTCAGCGGGCAAATTCCCAGTAATTTGTTTGCTATGAAGAATCTAATCGGACTGTTTCTTTGGCAAAATAAGCTATCTGGGGAATTACCTACAGAAATCGAAGCTTTGAATCTCACTGTACTCGATGTTTCAGATAATATGCTTACTGGGAAAATCCCAGAAAGTTTAGGGAAGCTGAAAAACCTTTCAGGTTTGAGTTTGGATATGAATCAACTATCAGGAGAGATACCAGATAAACTTGCTAATCTACCAGCTCTAGTAGATTTCATGGTTTTTCAGAACAATCTCTCTGGTTCTCTTCCTCTGTACTTCGGTCGTTATTCGCCCCTCGAAACCTTTCAGATTGCTTCAAATAGATTGACAGGAAAATTGCCAGAAGATTTATGTTACAATGGCAGGTTAGTTGGAGTAAGTGCTGATGACAACAATCTAAGTGGAGAGCTATCAGAATCATTAGGGAGCTGCGAGAGCCTGCAATACTTGTTTCTTGATCATAATAGTTTTTCCGGCAAAATCCCCGGCGGACTTTGGACGTCATATAATTTGACGACTTTAAAGATCAACGACAATAAGTTCGCCGGTGAGCTACCTCAAAGATTGGCTTGGAATCTTTCACGTTTGTCCATAAGCAACAATCAATTCTCTGGTAGAATTCCAGAAGGAGTATCTACATGGAAGAATCTGGTTGTGTTTGAAGCTAGTAAGAATCTCTTCAATGGAAGTATTCCACGAGAGCTTACGAATCTTCGTAAGCTAACAATATTGTTGCTTGATCAAAACCAGCTTACAGGGCCACTTCCATCAGAAATCATCTCTTGGGAATCCCTCAATGCTCTAAATTTGAGCCACAATCAACTCTCTGGACAAATCCCGGATTCGATCGATCGTTTACCGGTCCTTTCGGAACTAGACTTGTCAAATAATCAGCTCTCTGATCATGTTCCACCTCAACTTGGTAAATTGTCAATGACACTCACAAACCTTAATCTCTCCTCGAATCTTTTCACCGGGACCATTCCGATTGAATTCGAAAACCTTGTTTATTCCCACAGCTTTCTAAACAATTCTGGTCTCTGTGCTAATACCAAAAAGTTAAACCTTCCCTTATGCAATTCTGGTTCTGGCCTTGATCAAAGTTTAAGCAAGAGATCATCTGTGTCTCTTGCTTTGATCATAGGCCTAGTGGTAGTGGCCTCTTTAGCAGTTTTCTTGGTTTTACTCTTGATTTTCAGAGTTTACATATCAAGAAAGCGAGAATTGGATACTTCATGGAAGTTGACTTCCTTTCAGAGGCTAAGTTTCTCGGGGATGAACATCGTGCCGTCGTTGACGGATCATAATATTATAGGCCAAGGTGGGTATGGTACGGTATATCAAGTCCCCGTCGATGGTTTTGGCTATGTTGCGGTGAAGAAGATATTGAGTAACAAGAAGTGGGAGCAGAAATTTGAGGATGCATTCCTAGCAGAAGTTAAGATTTTGAGCAACATTAGACACAACAATATTGTGAAACTCTTGTGTTGTATGTCGAACGAGGATTCTTTGCTGCTTGTGTATGAATATCTAGAAAACAATAGCCTCGATCGCTGGTTGAGCAAGAAGAATAGGTCAAACCATAATTTCGTTCTTGATTGGCCAAAAAGATTGCAGATAGCCATTGGAGCTGCACAAGGTCTAACCTATATGCACCATGATTGCTTCCCTCCTATCGTTCATCGTGATATCAAAACAAGTAACATCCTTTTGGATCCCGAGTTCAATGCGAAAGTCGCAGACTTTGGTCTTGCAAGAATATTGATCAAGCCAAGCGAACTCACCTTGTCGGGTGTAGCTGGATCATTTGGCTATATTGCTCCAGAATATATTCAAACAACGAAGATCAATGAAAAGATCGATGTGTATAGCTTTGGGGTGGTGTTGCTGGAACTGACAACCGGAAAAGAAGCGAATCGCGGAGATGAACACTCATCTCTTGCTGAATGGGCATGGCGTCACGTGCAGTTGGGCGGCGATGTGGAAGAAGTCCTAGACGAAGAAATTATGGAAGCATGCTATATGGATGAAATATGCAGTGTCTTCAAACTTGGGTTGATGTGTACTGCAATACTGCCAGCTAGTAGGCCTTTCATGAAGGAGGTTGTGCAGTATTTGCTTCGCTGCCGGGACTCATATGGTTACGGAGAAAGGAGTCCCGGAATCTTTGATGCTGTTCCTCTGTTGAAGAATTCAAAGAGGGAACGTAGATTGGATATTGATGATGATGATGATGATGATGATGATTTATAG 3015 0.4153 MPRLFYFFFFIVLSDAQTQSHLYDQEHAILLNIKQHFHPFLNQWAPLNSSHCSWPGIICTDNSVTKLDFGDLNITKTMPPFICDLKNLTFIDFQFNYFSGEFPKFLYNCSKLEHLDLSQNSFVGPIPKDIDRLANLRFLSLGGNYFSGEIPASIGRLKELRNLQLYWCQFNVSIPDEISDLSSLEFLHLGNNTDLPPTQFPLSFTKLKKLKTLWMFSMNLIGKIPESIVEMVSLEQLDLSQNSFSGQIPSNLFAMKNLIGLFLWQNKLSGELPTEIEALNLTVLDVSDNMLTGKIPESLGKLKNLSGLSLDMNQLSGEIPDKLANLPALVDFMVFQNNLSGSLPLYFGRYSPLETFQIASNRLTGKLPEDLCYNGRLVGVSADDNNLSGELSESLGSCESLQYLFLDHNSFSGKIPGGLWTSYNLTTLKINDNKFAGELPQRLAWNLSRLSISNNQFSGRIPEGVSTWKNLVVFEASKNLFNGSIPRELTNLRKLTILLLDQNQLTGPLPSEIISWESLNALNLSHNQLSGQIPDSIDRLPVLSELDLSNNQLSDHVPPQLGKLSMTLTNLNLSSNLFTGTIPIEFENLVYSHSFLNNSGLCANTKKLNLPLCNSGSGLDQSLSKRSSVSLALIIGLVVVASLAVFLVLLLIFRVYISRKRELDTSWKLTSFQRLSFSGMNIVPSLTDHNIIGQGGYGTVYQVPVDGFGYVAVKKILSNKKWEQKFEDAFLAEVKILSNIRHNNIVKLLCCMSNEDSLLLVYEYLENNSLDRWLSKKNRSNHNFVLDWPKRLQIAIGAAQGLTYMHHDCFPPIVHRDIKTSNILLDPEFNAKVADFGLARILIKPSELTLSGVAGSFGYIAPEYIQTTKINEKIDVYSFGVVLLELTTGKEANRGDEHSSLAEWAWRHVQLGGDVEEVLDEEIMEACYMDEICSVFKLGLMCTAILPASRPFMKEVVQYLLRCRDSYGYGERSPGIFDAVPLLKNSKRERRLDIDDDDDDDDDL 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0707 1004 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Lele47g0707 1004 SMART LRR_typ_2 540 564 IPR003591 -
Lele47g0707 1004 SMART LRR_typ_2 231 255 IPR003591 -
Lele47g0707 1004 SMART LRR_typ_2 302 326 IPR003591 -
Lele47g0707 1004 SMART LRR_typ_2 133 157 IPR003591 -
Lele47g0707 1004 SMART LRR_typ_2 181 202 IPR003591 -
Lele47g0707 1004 SMART LRR_typ_2 492 516 IPR003591 -
Lele47g0707 1004 Gene3D Ribonuclease Inhibitor 198 347 IPR032675 -
Lele47g0707 1004 Gene3D Ribonuclease Inhibitor 133 197 IPR032675 -
Lele47g0707 1004 PRINTS Leucine-rich repeat signature 540 553 - -
Lele47g0707 1004 PRINTS Leucine-rich repeat signature 519 532 - -
Lele47g0707 1004 FunFam Receptor-like protein kinase HSL1 isoform A 23 172 - -
Lele47g0707 1004 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 255 961 - -
Lele47g0707 1004 Pfam Protein kinase domain 688 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0707 1004 FunFam Leucine-rich repeat receptor-like protein kinase TDR 299 615 - -
Lele47g0707 1004 SMART serkin_6 686 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0707 1004 SUPERFAMILY L domain-like 382 641 - -
Lele47g0707 1004 SUPERFAMILY Protein kinase-like (PK-like) 680 961 IPR011009 -
Lele47g0707 1004 Pfam Leucine Rich Repeat 280 302 IPR001611 GO:0005515
Lele47g0707 1004 FunFam Kinase family with leucine-rich repeat domain-containing protein 765 973 - -
Lele47g0707 1004 Gene3D Ribonuclease Inhibitor 348 618 IPR032675 -
Lele47g0707 1004 SUPERFAMILY L domain-like 74 462 - -
Lele47g0707 1004 Gene3D Phosphorylase Kinase; domain 1 665 764 - -
Lele47g0707 1004 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 177 277 - -
Lele47g0707 1004 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Lele47g0707 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Lele47g0707 1004 Gene3D Ribonuclease Inhibitor 25 132 IPR032675 -
Lele47g0707 1004 ProSiteProfiles Protein kinase domain profile. 686 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0707 1004 Pfam Leucine rich repeat 516 553 IPR001611 GO:0005515
Lele47g0707 1004 Pfam Leucine rich repeat 87 145 IPR001611 GO:0005515
Lele47g0707 1004 Gene3D Transferase(Phosphotransferase) domain 1 765 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0707 Lele-ChrLele47 13026632 13029726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0707 26 998 Receptor kinase-like Gene Family AT5G25930 50.000 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele47g0707 Pkinase 1.5e-47 CL0016