Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0702 ATGTTGAATTCTCGTTGTATTTGCTTTCTTCTTCTTGTTCTCTTTTTTCTGCAAAATCCTTCTGCAACATTGTGCCATACCAAGGGACTTAGACCCGGCCGGCATACTTATTCGGGTCCTGGGTTATCCATTAACAGGACCCAAGTCCAGAATTCGGAGCAGCAATTCACAAGATGGGTTAACTTTGTTGGTAGTCTCAAGCATTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTTGCTTCTTACACTCTTCACGTTTCTAAGAATCCTGCCGTAGCAGATTTTTCAACTATTCAAGAAGCCATTGATTCTCTTCCTTCCATTAATCTCGTGAGAGTGGTTATTAAGGTTCATGCAGGTGTTTACCCTGAGAAAGTGAACATTCCTCCTATGAAATCCTTCATAACCATAGAAGGATCAGGAGCAGATAACACCATAGTTCAATGGGGTGATACAGCTCAAACACCAGGTCCCCGAGGACAACCATTAGGAACATACGGTTCCGCAACATTTGCAGTGAACTCACCTTATTTCATTGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCAGCACCAGGAGCAGTAGGGAAACAAGCAGTGGCATTAAGAATATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAAGATACATTGTATGACCATGTAGGAAGGCATTATTACAAGGATTGCTACATCGAAGGCTCGGTGGATTTCATATTCGGGAACGCGCTGTCTCTGTTCGAGGGGTGTCACGTGCATGCAATAGCACAGAGGTTAGGGGCGTTAACAGCACAAGGAAGAAGCAACATAATGGAGGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACTGGTTCAGGAGTGATATACCTTGGAAGGGCTTGGGGTCCATTTTCACGTGTGGTTTTTGCTTACACTCACATGGACGACATCATCATTCCCAAGGGCTGGTATAACTGGGGCGACCCTAACCGTGAAATGACAGTATTCTATGGACAGTACAAGTGCACAGGACCAGGAGCTAGCTTTGCAGGCAGAGTATCATGGTGTAAAGAACTCACCGCTGAGGAAGCTAAGCCTTTTATTTCCCTTAGCTTCATTGATGGTGATGAGTGGACCAGATTATAG 1149 0.443 MLNSRCICFLLLVLFFLQNPSATLCHTKGLRPGRHTYSGPGLSINRTQVQNSEQQFTRWVNFVGSLKHSVFKTAKNKLFASYTLHVSKNPAVADFSTIQEAIDSLPSINLVRVVIKVHAGVYPEKVNIPPMKSFITIEGSGADNTIVQWGDTAQTPGPRGQPLGTYGSATFAVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQRLGALTAQGRSNIMEDTGFSFVNCKVTGSGVIYLGRAWGPFSRVVFAYTHMDDIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWCKELTAEEAKPFISLSFIDGDEWTRL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0702 382 FunFam Pectinesterase 80 382 - -
Lele47g0702 382 SUPERFAMILY Pectin lyase-like 80 380 IPR011050 -
Lele47g0702 382 Gene3D - 80 382 IPR012334 -
Lele47g0702 382 Pfam Pectinesterase 93 377 IPR000070 GO:0030599|GO:0042545
Lele47g0702 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Lele47g0702 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 75 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0702 Lele-ChrLele47 12972970 12977525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0702 84 382 Carbohydrate Esterase AT1G05310 48.208 1.75e-101 304