Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0694 ATGATTACTTATAATTCACATGAACTCATACAATCATCTTCTCTTCTCAAAATGGGGCAGACCTTTGTTCTCTTTTTCCTCTTACTTCTCTTCCATTTAGCTCCAGCAAAAGCTGCTCTTGATGTTGGTGTCGGTGTAGGAATCGGTATCGGCATTGGAAATGGCGGTGGCAGTGGTAGTGGAGGAGGCGGAGGTGGTGGTGGGGCTAATGGCCCAAAATCTTCAAAGATGGACGTAGCTTACAAAAGTCTGCAAGCATGGAAATCAGCTATAACTGATGACCCATTAAAGATTCTTGATACTTGGATAGGTTCTAACGTTTGTTCTTATAAAGGAGTGTTTTGTTCTAGTGCATCATCATCAGATGGCAATTCTTTTGTTGCAGGAATAGATCTGAACCACGCAAATCTTCAAGGAACTCTTGTTAAAGATCTATCTTTACTCACTGATATGTCTCTTGTTCACCTTAACAGCAACAGATTCACTGGTTCAGTTCCTGAAACATTCAAAGATCTTTCATCTCTTGAAGAACTAGACCTCAGTAACAACCAGTTTTCAGGTGAATTCCCCACTGTAATTTTGAAAATGCCAAGTATCGTTTACTTAGACCTCAGATTCAACTCCTTCTCCGGAACCCTCCCAGATCAACTTTTCAGTAAAAATCTTGACTCAATTCTCCTCAACAATAACCAATTCGAAGGCGAAATCCCACAGAATCTTGCTTCTTCCTCAGCTTCTGTTATCAACCTAGCTAACAACAAATTCACTGGAAACATCCCCATAACTAGTTTAGGTTTAGTGGGTAGTTATAATTCTAAGCTGAAGGAGATTCTGTTCTTGAATAACCAGTTAACAGGCTGTATTCCTCAAGGAGTGGGATTGTTCAGAGACGTGCAAGTTCTTGATGTGAGCTTTAATTCATTGGTGGGTCATTTGCCAGGAACACTATCTTGTTTAGAAGATATTGAAGTTCTTAACTTGGCACATAACCAGCTTTCTGGGGAATTATCAGATGTGATATGTTCGTTGAAGAGTTTAGTGAATTTGACTGTGGCTTATAATTTTTTTAATGGGCTGAGTCAAGAATGTTCGAGGCTTTTGATTAGGAATGTGGGTTTTGATTTCTCCGATAACTGCATTCCTGGGAAGAATATGCAGAGACCTAAACCAGAATGTTCTGTGATCCCAGGTGGTAGCTTAAGTTGTCTCAGAATCCCCATACCAAAGCCTCTTGATTGTGCTTCGTTAGCCATAACTTCTCCTTGA 1266 0.4013 MITYNSHELIQSSSLLKMGQTFVLFFLLLLFHLAPAKAALDVGVGVGIGIGIGNGGGSGSGGGGGGGGANGPKSSKMDVAYKSLQAWKSAITDDPLKILDTWIGSNVCSYKGVFCSSASSSDGNSFVAGIDLNHANLQGTLVKDLSLLTDMSLVHLNSNRFTGSVPETFKDLSSLEELDLSNNQFSGEFPTVILKMPSIVYLDLRFNSFSGTLPDQLFSKNLDSILLNNNQFEGEIPQNLASSSASVINLANNKFTGNIPITSLGLVGSYNSKLKEILFLNNQLTGCIPQGVGLFRDVQVLDVSFNSLVGHLPGTLSCLEDIEVLNLAHNQLSGELSDVICSLKSLVNLTVAYNFFNGLSQECSRLLIRNVGFDFSDNCIPGKNMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAITSP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0694 421 SUPERFAMILY L domain-like 85 380 - -
Lele47g0694 421 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 73 405 - -
Lele47g0694 421 Gene3D Ribonuclease Inhibitor 267 394 IPR032675 -
Lele47g0694 421 PRINTS Leucine-rich repeat signature 175 188 - -
Lele47g0694 421 PRINTS Leucine-rich repeat signature 319 332 - -
Lele47g0694 421 FunFam Leucine-rich repeat extensin-like protein 1 81 242 - -
Lele47g0694 421 Gene3D Ribonuclease Inhibitor 79 192 IPR032675 -
Lele47g0694 421 Gene3D Ribonuclease Inhibitor 193 266 IPR032675 -
Lele47g0694 421 Pfam Leucine rich repeat 154 208 IPR001611 GO:0005515
Lele47g0694 421 Pfam Leucine rich repeat N-terminal domain 82 116 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0694 Lele-ChrLele47 12807392 12809282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0694 73 404 Leucine-rich Repeat extension Gene Families AT3G24480 49.408 9.09e-107 322