Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0692 ATGATAAGGATGAGCAGTTTGAAGAACAAGAGTGATCTGATAGACGCCAAGCTGGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGTCCTGCTTGCGGACACAAGTTTCAATCCAAACCAGACTGGGTGGGTCTACCAGCAGGAGTTAAATTTGATCCAACAGACCAAGAACTGATCGAACACCTCGAAGCCAAAGTTGAATCTAAGATCATGAAATCTCATCCTCTTATCGATGAGTTCATTCCCACCATCGATGGAGAAGACGGTATCTGCTACACCCATCCCGAGAAACTCCCAGGAGTGACGAGGGATGGGTTGAGCAGGCACTTTTTTCACAGGCCATCGAAGGCGTATACGACAGGGACGAGGAAGAGAAGGAAAATCCAGAACGAGTGTGATCAGTTACAAGGAGCTGGGGGAGGAGGAGAAACCAGATGGCACAAAACTGGAAAAACCAGACCAGTTCTTGGGAATGGCAAACAGAAAGGTTGCAAGAAAATCCTCGTACTCTACACCAACTTTGGTAAGAACCGAAAGCCTGAGAAGACCAATTGGGTTATGCATCAATACCATTTGGGACAACATGAAGAAGAGAAAGAAGGCGAGCTTGTCGTCTCCAAGATATTCTTCCAGACACAGCCCAGACAATGTAACAACAACAACAACAACATTGTTAATACAAATAATAATAATAGTAATTGGTCGGAGAGGAGCGCAACGACGGGAGAAGCGAGCGGAGATCAGCCGAATAGTAATAGTAGAAGAGAGAGTACAAGTGGGAGTTGTTCTTCTAAAGAAATAGTCACTACTACTCATAGGGATCATGACGTCTCTACCACTGTTGCTGTTGCTGTTCCTCCGGCGCCATTAACGTCGACGACCTTCACTGCTTTGGATCATCATCAACACCTCAAATCCGACCATTTCAGCTTCATCCCATTCAGAAAAACCTTCGATGAGGTGGGAATTGGAGATGCTTCTAGAGCAAGAGAAGTAGTGCAAGTTTCAGGTAATTCATCAGCAGAAGGAGGCAACCATCATCATCATCATCAACAACAACAGAATATTACAGCAAATTCAGCATTTCATATGATGAGTAGGCCTTCACATCCTATTTCTACCATTATCTCTCCATCACCTCTTCCTTCGCACCACAATACCTCCATCATCCTTGACGATGTCACCAGATTAATGCTCCAAAATGATCATCATTTCCAGCAACAACATCATAAACTTGAAGGAAGGTCTGCTTCTGGCTTGGAGGAACTCATTATGGGATGCACTTCAACTAATCATTCTAAAGAGGAGTCATCTATCACACATTATCAACAAGAAGCTGAATGGTTGAAGTATTCTTCGTACTGGCCTGATTCTGATAATCCAGGTCATCATCATGGTTAG 1401 0.4411 MIRMSSLKNKSDLIDAKLEEHQLCGSKQCPACGHKFQSKPDWVGLPAGVKFDPTDQELIEHLEAKVESKIMKSHPLIDEFIPTIDGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDQLQGAGGGGETRWHKTGKTRPVLGNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFFQTQPRQCNNNNNNIVNTNNNNSNWSERSATTGEASGDQPNSNSRRESTSGSCSSKEIVTTTHRDHDVSTTVAVAVPPAPLTSTTFTALDHHQHLKSDHFSFIPFRKTFDEVGIGDASRAREVVQVSGNSSAEGGNHHHHHQQQQNITANSAFHMMSRPSHPISTIISPSPLPSHHNTSIILDDVTRLMLQNDHHFQQQHHKLEGRSASGLEELIMGCTSTNHSKEESSITHYQQEAEWLKYSSYWPDSDNPGHHHG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0692 466 MobiDBLite consensus disorder prediction 136 158 - -
Lele47g0692 466 MobiDBLite consensus disorder prediction 215 267 - -
Lele47g0692 466 FunFam NAC domain-containing protein 73 54 215 - -
Lele47g0692 466 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 9 352 IPR044799 GO:0003700
Lele47g0692 466 SUPERFAMILY NAC domain 40 211 IPR036093 GO:0003677|GO:0006355
Lele47g0692 466 ProSiteProfiles NAC domain profile. 45 211 IPR003441 GO:0003677|GO:0006355
Lele47g0692 466 Gene3D NAC domain 54 216 IPR036093 GO:0003677|GO:0006355
Lele47g0692 466 MobiDBLite consensus disorder prediction 215 274 - -
Lele47g0692 466 MobiDBLite consensus disorder prediction 335 355 - -
Lele47g0692 466 Pfam No apical meristem (NAM) protein 46 192 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0692 Lele-ChrLele47 12725475 12729146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0692 7 455 NAC Transcription Factor Family AT5G56620 50.106 1.91e-133 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele47g0692 NAM 6.2e-24 No_clan