Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0673 ATGGCGAGAAAGTGCTCGCATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATATTTTAGAAGAACTTGTGTAGGACTTCGTCTCTTTGGTGTTCAGCTTGAAACATCTTCTCCTTCTTATGCTTCTTCTTCTTGTGTTTTCTCCATTAAGAAAAGTTTGAGCGTGGATTCTTTACCAGCTTCATCATCGTCATCTTCCCCATCTTCATCGTTCTCCAATTCATCAAGAATCACCATTGATGAAAACTTTGCGGCAGAGAGATCCTCTGTTGAGTATCTATCAGACGGTCTAATAGATGCCGCATCAGCACAAGACAGAAGAAAAGGAGTAGCTTGGACAGAAGATGAACACAGAAGATTCCTGGTTGGACTTGAGAAGCTAGGAAAAGGAGATTGGAGAGGAATCTCCAGAAATTATGTAACAACAAGAACACCTACTCAAGTAGCTAGTCATGCTCAAAAATACTTTCTTCGGCTTGCCGCCTTTAACAAGAACAAGAGACGATCAAGCCTCTTCGACATGGTGGGTATACAAGAGGATGTTAAATCTGGAAACTCCAATAATAAGTGTGAAGAAGATGACCTGCAGAATGATACTAGCTTGACATTGATGGGCCAAAAGGGAACTAAATCTGAAGCAATAATAGTGCCTACGTGGCAGAATAATAATTCCCAGATGAAGAAATCTTCTTTTTCACCCACATCATCATCGCCTGATCTGGAGCTCACCCTTGCAGCACCCAAGTCCTTGCAACAAAATGGATCATCATCTTCTTCTTCTTTTCTTCTAAGCTCTATTTGTGTCACCTAA 816 0.4118 MARKCSHCGKIGHNSRTCTYFRRTCVGLRLFGVQLETSSPSYASSSCVFSIKKSLSVDSLPASSSSSSPSSSFSNSSRITIDENFAAERSSVEYLSDGLIDAASAQDRRKGVAWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAFNKNKRRSSLFDMVGIQEDVKSGNSNNKCEEDDLQNDTSLTLMGQKGTKSEAIIVPTWQNNNSQMKKSSFSPTSSSPDLELTLAAPKSLQQNGSSSSSSFLLSSICVT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0673 271 FunFam transcription factor MYB1R1 112 163 - -
Lele47g0673 271 Gene3D - 112 164 - -
Lele47g0673 271 ProSiteProfiles Myb-like domain profile. 106 158 IPR001005 -
Lele47g0673 271 SMART sant 110 160 IPR001005 -
Lele47g0673 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 162 IPR017930 -
Lele47g0673 271 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 110 160 IPR006447 GO:0003677
Lele47g0673 271 Pfam Myb-like DNA-binding domain 113 158 IPR001005 -
Lele47g0673 271 CDD SANT 113 158 IPR001005 -
Lele47g0673 271 PANTHER TRANSCRIPTION FACTOR KUA1 3 232 - -
Lele47g0673 271 ProSiteProfiles SANT domain profile. 114 162 IPR017884 -
Lele47g0673 271 SUPERFAMILY Homeodomain-like 108 161 IPR009057 -
Lele47g0673 271 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0673 Lele-ChrLele47 11704370 11705726 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele47g0673 Myb_DNA-binding 2.3e-11 CL0123