Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0667 ATGTCTTCCGATTTAGATGAGCGCGGGGAGCAGCTGAGGCTAACGGTAGATGTGGATGCTCGGACTCAGATTGACAAGCCTTCCAAATTTAAAATTCGAAATCTCACCAAAGTCTCCGATGCCGGAGTTATGATTCTCAAGGGTATCGACTTGGACGTTCCCAAGGGCGTGATACTCGGCGTCATCGGACCCAGCGGTAGCGGCAAATCGACACTTCTCAGGGCCTTGAACCGCCTCTGGGAGCCTCCCTCCGGCACCGTCTTTCTCGATCATAAGGATATCTGCGATCTCGATGTTCTCTTCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTCGAAGGCACGGTGGCAGACAATGTGAGGTATGGGCCACAACTAAGAGGGAAAAAACTAAGTGATCAAGAGGTACGCAAGTTGCTGATAACAGCAGACCTTGATGCTTCTTTCATGAACAAGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGAGTTGCACTTGCCAGGACTTTAGCTAATTCCCCAGAGGATGAGCCAACCAGTGCGCTAGATCCAATATCAATAGAGAACATAGAAGATGCTCTAATGAAGCTGAACAAGAACAATGCTCTGAATGCTATTGATATTGGAGTTGCTAAACTAAAGAAAGTGACATCGAATAAGGGGGAAACTGAGCATGTTAAAGGTGAACTAGAGCTTAGCCATCCAAAAACTGCATATGTTAAGTCGGTCAATTCAACTAGTAAGACTGAGCAAGCAGGAGCTATAGGGGCAAAATTACCCAAGCACTTGAGTGTTAATAAAGAAGAATTCATTCTTACTGAAGCTTAG 843 0.4709 MSSDLDERGEQLRLTVDVDARTQIDKPSKFKIRNLTKVSDAGVMILKGIDLDVPKGVILGVIGPSGSGKSTLLRALNRLWEPPSGTVFLDHKDICDLDVLFLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLSDQEVRKLLITADLDASFMNKKGSELSVGQAQRVALARTLANSPEDEPTSALDPISIENIEDALMKLNKNNALNAIDIGVAKLKKVTSNKGETEHVKGELELSHPKTAYVKSVNSTSKTEQAGAIGAKLPKHLSVNKEEFILTEA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0667 280 SMART AAA_5 55 274 IPR003593 -
Lele47g0667 280 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Lele47g0667 280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 257 IPR003439 GO:0005524
Lele47g0667 280 CDD ABC_PstB_phosphate_transporter 30 205 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele47g0667 280 Pfam ABC transporter 46 184 IPR003439 GO:0005524
Lele47g0667 280 Gene3D - 25 254 IPR027417 -
Lele47g0667 280 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 11 208 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele47g0667 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0667 Lele-ChrLele47 11516482 11522699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0667 43 199 Calmodulin-binding Proteins AT2G36910 36.416 5.58e-22 94.0