Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0666 ATGTCTTCCGATATGGATGAGTGCCGGGAACACCTGCTAGTGGTAGATGTGAATACTCAAACTCAGATCGACAAGCCTTCCAAATTTCAGATTCGAAATCTCACCAAAGTCTCCGATGCCGGAGTTCCGATTCTCAATGGCATCGACTTGGACGTACCCAAGGGCGTGATACTCGGCGTCGTCGGACCCAGCGGTAGCGGCAAATCCACGCTTCTCAGGGCCTTCAACCGACTCTGGGAGCCTCCCTCCGGCACCGTCTTTCTCGATCATAACGATATCTGTGATCTCGATGTTCTCTCCCTCCGGCGTAAGGTCGGCATGCTCTTTCAACTCCCTGCCCTCTTCGAAGGCACGGTGGCAGACAATGTGAGGTATGGACCACAACTAAGAGGGAAAAAGCTAAGTGACGAAGAGGTACGCAAGTTGCTGATAACAGCAGACATGGATGCTTCTTTCATGAACAAGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGAGTGGCACTTGCTAGAACTTTAGCTAATTCCCCAGAGGTTTTACTGTTGGATGAGCCAACCAGTGCACTAGATCCAATATCAACGGAGAATATAGAAGACGCTCTAATGAAGCTGAACAAGAACAGTGGTATGACAGTGATAATTGTCTCTCACAGCATCAAACAGATACAAAGGATAGCTGACTTGGTGTGCCTACTTGTTGATGGTCAAATTGTTGAAGTTCTAAAGCCTGATCAATTGTCACAAGCCCTTCATCCCATGGCCCAAAGGTTTCTTCAAATTAGTTCCTAG 792 0.4823 MSSDMDECREHLLVVDVNTQTQIDKPSKFQIRNLTKVSDAGVPILNGIDLDVPKGVILGVVGPSGSGKSTLLRAFNRLWEPPSGTVFLDHNDICDLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLSDEEVRKLLITADMDASFMNKKGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNSGMTVIIVSHSIKQIQRIADLVCLLVDGQIVEVLKPDQLSQALHPMAQRFLQISS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0666 263 FunFam ABC transporter, ATP-binding protein 26 258 - -
Lele47g0666 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Lele47g0666 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 250 IPR027417 -
Lele47g0666 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele47g0666 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
Lele47g0666 263 SMART AAA_5 54 245 IPR003593 -
Lele47g0666 263 Gene3D - 24 261 IPR027417 -
Lele47g0666 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Lele47g0666 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 1 262 IPR005670 GO:0005315|GO:0016020|GO:0035435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0666 Lele-ChrLele47 11507873 11511086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0666 42 247 Calmodulin-binding Proteins AT2G36910 37.156 1.89e-32 124