Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0658 ATGGCTGCAATTTTTGCATCTAAATGTTCTCGTGTGGGCCATTCTCTGCTTGGCGGGCTTGGCAATAGTTTATCTGGTTTAGTCACCACATCACAAGGGATCGTATGCAGCAAATTCTTATCTCAGCAGCAACAACGCACTTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAATTCAGGGGCTAAGAAGGTTATGTGCATACAACCTCTGAAAGGGAGGAAAGGGGCAAGATTGGGTGACACCATAATTGCATCAGTAAAGGAAGCCCATCCTAATGGAAAAGTTAAAAAAGGAAAAGTCGTGTACGGTGTGGTTGTGCGTGCGGCAATGCAAAGGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTCGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACGAGAGTTTTCGGGCCGGTCCCACATGAGCTGAGGATGAAGAAACATGTTAAAATACTTACTTTAGCAGGGCACATTGCTTAA 504 0.4603 MAAIFASKCSRVGHSLLGGLGNSLSGLVTTSQGIVCSKFLSQQQQRTFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0658 167 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 49 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 TIGRFAM rplN_bact: ribosomal protein uL14 49 166 IPR005745 GO:0003735|GO:0006412|GO:0015934
Lele47g0658 167 SUPERFAMILY Ribosomal protein L14 49 166 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 Hamap 50S ribosomal protein L14 [rplN]. 48 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 Gene3D Ribosomal protein L14 48 167 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 SMART Ribosomal_L14_2 48 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 FunFam 50S ribosomal protein HLP, mitochondrial-like 48 167 - -
Lele47g0658 167 Pfam Ribosomal protein L14p/L23e 49 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele47g0658 167 ProSitePatterns Ribosomal protein L14 signature. 105 131 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0658 Lele-ChrLele47 11266084 11269640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0658 59 150 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.694 4.14e-09 50.4