Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0654 ATGGGTATTTGCTTCAGCATTGACTCTGATACAAAGGCCCCAGGATATGAATCCGTCACACCAACTAAGCAAGATAGAAGCAGAAGCTACAATTCATCATCTCCTATGAATATCAAAGATCTTCGCCAAAGTCCTGGCTATAGGAATGTTGATATATTTTCCTATGATGAACTGAGGTTGGCCACCAAGCACTTTCGTCCAGACTTAATTCTGGGAGAGGGTGGTTTTGGAGTTGTGTATAAAGGAGTGATAGATGAAAATGTAAGGCCAGGTTACAAGACCACACAGGTTGCTATTAAAGAGCTAAATCGAGAAGGAATTCAGGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGCCAGTTCAGTCACCCAAATCTTGTAAAGCTTATTGGTTATTGTTGTGAGGATGAACATCGATTACTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAGAAACACCTTTTTCGCAGAGTGGGCTCAACGCTTACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGGTCCATCATATATCGTGACTTCAAGACATCAAATATTTTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGACCTATGGGAGACCAAACCCATGTTTCAACACGTGTGATGGGCACATATGGATATGCTGCGCCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGATGTGTATGGTTTTGGGGTAGTGCTGCTTGAGTTGCTTATTGGAAGGAGAGCATTAGACAAAAGCAGGCCCAGCAGACAACACAACTTGGTTGAGTGGGCACGTCCACTGTTGAATCATAATAAGAAACTCCTTAAAATCTTAGACCCTAGAATGGATGGCCAATATTCCGCTAAAAGTGCAATAAAGGTGGCCCATCTGGCAAACCAATGTCTTAGCCAAAACCCAAAAGGTAGGCCTCTAATGAGTCAGGTTGTTGAAATTCTTGAAAATTTTCAGTCAAAGGAGGAAAATGAAGAAGAGCAAATGCTTCGAATTGGCAGTAGCAGTATAACCCTTTATGAGGTTCCAAATGACACTAGAGAAACTCCAGCAACTGGAAAAAGCCAATGTGAAAAGGATGACCATATTGCTTGTCTACCTTGA 1185 0.4228 MGICFSIDSDTKAPGYESVTPTKQDRSRSYNSSSPMNIKDLRQSPGYRNVDIFSYDELRLATKHFRPDLILGEGGFGVVYKGVIDENVRPGYKTTQVAIKELNREGIQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERSIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSRQHNLVEWARPLLNHNKKLLKILDPRMDGQYSAKSAIKVAHLANQCLSQNPKGRPLMSQVVEILENFQSKEENEEEQMLRIGSSSITLYEVPNDTRETPATGKSQCEKDDHIACLP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0654 394 MobiDBLite consensus disorder prediction 14 38 - -
Lele47g0654 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lele47g0654 394 FunFam Probable serine/threonine-protein kinase PBL8 148 361 - -
Lele47g0654 394 ProSiteProfiles Protein kinase domain profile. 65 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0654 394 Pfam Protein tyrosine and serine/threonine kinase 70 342 IPR001245 GO:0004672|GO:0006468
Lele47g0654 394 FunFam Serine/threonine-protein kinase BIK1 32 147 - -
Lele47g0654 394 CDD STKc_IRAK 71 345 - -
Lele47g0654 394 PANTHER OS01G0588500 PROTEIN-RELATED 32 346 - -
Lele47g0654 394 ProSitePatterns Protein kinases ATP-binding region signature. 71 100 IPR017441 GO:0005524
Lele47g0654 394 Gene3D Phosphorylase Kinase; domain 1 40 147 - -
Lele47g0654 394 Gene3D Transferase(Phosphotransferase) domain 1 148 365 - -
Lele47g0654 394 SUPERFAMILY Protein kinase-like (PK-like) 44 343 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0654 Lele-ChrLele47 11146963 11153155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0654 53 342 Glycoside Hydrolase AT3G07070 51.195 2.65e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele47g0654 PK_Tyr_Ser-Thr 1.1e-47 CL0016