Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0650 ATGGAAGGAAAACGTGTAGCCAAAGACGTTACTCCCAGGACCAGGAACGCTAGCCCTCTCAAGGTGTTTTATGTTGCGGTTTCTGATGCTGAAGAAATAACGATACACAAGGTTTGCTTTTCAGCGGTAAAAATGTTGGAAGGTGGTGCGAAATTTCCTGGTATAATAGACCTAAACAAGCATAATAATAACTACTATGATTTTTCTCAAGGTTTTTACCACAAGTTGGAAGAAGGTACAAATATGTCAGTTGACAGCATTGGAAGCATGCAAACAAGCAATGGCGGGGGATCTGTTGCAATGTCTATTGATAATAGCAGTGTTGGCTCCAATGATTCACATACTCGCATTTTAAACCACCAAGGGTTGCGAAGGCGGGCCAACGATAACTACTCTGTTGCTCACAGTGTGAACCGTAGAGGAAGAGTTACTCATGCTTTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGACAGCAGCTCCCCAACTGAGGGCCTTGACAATTTTGATGAGTGGACAATTGATTTGAGAAAGCTTAGTATGGGTGAGCCTTTTGCACAAGGGGCTTTTGGGAAACTATACAGAGGGACCTACAATAATGAAGATGTTGCGATCAAAATATTGGAGAGGCCTGAAAATGATCTTCCAAAGGCTCAGTTGATGGAACAACAATTTCAGCAGGAGGTCATGATGCTGGCTACACTAAAGCATCCTAATATAGTTCGTTTCATTGGTGCATGCCGTAAGCCAATGGTTTGGTGTATTGTAACAGAATATGCTAGAGGTGGTTCAGTTAGACAGTTTTTAATGAAGCGCCAAAATCGATCAGTTCCCCTCAAATTGGCCGTTAAACAGGCTTTGGATGTTGCAAGGGGGATGGCATATGTTCATGGCCTTCAATTGATCCACAGGGACCTGAAGTCTGACAATCTTTTAATTTTTGGTGACAAATCAATTAAAATTGCAGACTTTGGAGTTGCTCGGATTGAGGTGCAAACGGAAGGAATGACACCTGAAACTGGCACATATCGCTGGATGGCTCCAGAGATGATCCAACACAGGCCTTACACACAAAAGGTGGATGTATATAGCTTTGGTATTGTTCTTTGGGAGCTCATTACTGGAATGCTTCCATTTCAGAACATGACCGCCGTACAAGCGGCATTTGCAGTCGTTAACAGAAATGTTCGGCCGACCATACCCAACGACTGCTTACCCATTCTCCGAGACATCATGACAAGATGCTGGGATCCTAACCCTGATGTTAGGCCACCTTTTACTCAAATCGTAGCAATGCTAGAGAATGCAGAGACTGAGATCATGACAACCGTTCGTAAGGCCCGTTTCCGGTGTTGCATGACCCAACCCATGACATCTGACTGA 1383 0.4396 MEGKRVAKDVTPRTRNASPLKVFYVAVSDAEEITIHKVCFSAVKMLEGGAKFPGIIDLNKHNNNYYDFSQGFYHKLEEGTNMSVDSIGSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVAHSVNRRGRVTHALSDDALAQALMDSSSPTEGLDNFDEWTIDLRKLSMGEPFAQGAFGKLYRGTYNNEDVAIKILERPENDLPKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYARGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLQLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPTIPNDCLPILRDIMTRCWDPNPDVRPPFTQIVAMLENAETEIMTTVRKARFRCCMTQPMTSD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0650 460 PRINTS Tyrosine kinase catalytic domain signature 360 382 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 PRINTS Tyrosine kinase catalytic domain signature 257 270 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 PRINTS Tyrosine kinase catalytic domain signature 341 351 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 PRINTS Tyrosine kinase catalytic domain signature 404 426 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 PRINTS Tyrosine kinase catalytic domain signature 295 313 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 ProSiteProfiles Protein kinase domain profile. 179 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0650 460 Gene3D Transferase(Phosphotransferase) domain 1 262 457 - -
Lele47g0650 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Lele47g0650 460 FunFam Serine/threonine-protein kinase isoform 1 169 261 - -
Lele47g0650 460 SMART serkin_6 179 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0650 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 436 - -
Lele47g0650 460 FunFam serine/threonine-protein kinase HT1 262 455 - -
Lele47g0650 460 Pfam Protein tyrosine and serine/threonine kinase 180 433 IPR001245 GO:0004672|GO:0006468
Lele47g0650 460 SUPERFAMILY Protein kinase-like (PK-like) 162 433 IPR011009 -
Lele47g0650 460 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Lele47g0650 460 CDD STKc_MAP3K-like 186 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0650 Lele-ChrLele47 11034125 11039719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0650 68 460 MAP Kinase Kinase Kinase AT2G24360 79.644 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele47g0650 PK_Tyr_Ser-Thr 1.7e-66 CL0016