Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0642 ATGGCCTCGTCGACACCAGGTAGCTCTCGATCAACTTCTCTCAGGGATGACGACTCCGACGCTGCTAAACTCGAGGGTACCGGTAGCTGGGATGCCATCGAATGGACCAAAATTGAGCCCATCATTCGCCCCGTTTCACGGGAGAATTTAGATTTCTTGCTTGAAGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTGTTCTTGTTAATAACAACAATGTGGGTACATTAATGGTTACAAATTTTCGCTTCCTATTTGTGAGTGAGAAAACCGCAAAAGTTATTGCCCTTGGAACAATTCCACTTGCGACAATCGAGAAGTTTACCAAGATAGCTATGAAGACTCATTCAGCTCTTCGTCAGTTGGACAAAACACCATCACAAAGATTGTTGCAAGTCATTGGAAAGGATATGAGAATTATTGTTTTTGGTTTCAGACCTCGTACAAAACAGAGACGTGCAATATTTGAAGCATTACTGAGATTGACAAAACCTGCAAGACTTTGGGATCTCTATGCTTTTGTATCAGGGCCTTCTAGATTAAGCAACACCAACCCAAAAGTTCGCTTGCTGGATGAGTATTTTCGACTTCTTGGGAAAGGATCTTATTGTGGATCAATTAATATGATCAGAAGTGGGTCATTTACCTTGTCGAATTCCTCTTGGAGAATAAGTAGTGTGAATTCCAACTATACTATGTGTCAGACTTATCCATTTGCATTGATTATTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTCCACTTTTCGGGCAAGATGTCGACTGCCTGTAGTTTCATGGTGTGATTCTGGTTCTGGTGCAGTCATTGCTCGTTCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGGAGCAACGCAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGTAGGAAGCTATATATTTCTGACGCAAGACCAAGGAAAAATGCTTTAGCTAATGGGGCCATGGGAGGTGGTTCAGAGTCATCTTCAAATTACTTCCAATCTGAGATAGTCTTTTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGCTAGACTCAGAGAGTACTTAGATACTTATGGAAGAGCATCATCAGATGGAATGTCATCGTTTTTGAGGAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCTGCTTCAGTATCAACACTTGGGGACAGTGGATGGTTACTGCACATTCAGAATGCCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTTCTATTGAAAAGGCTTCTGTGCTTGTACATTGCAGTGATGGATGGGATAGAACAACTCAATTGGTTTCACTTGCTAGTTTGTTGCTTGATCCATACTATCGCACATTCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGTTAGCATTTGGTCATCCATTCTCAGATCGTGTTGGAATGCCATCAGTCACTGGAAGTGGCAACACTCCTTCTGAGTTGTCTTGGCAGTCTTCTGGAAATCACCCATCATCACCCATGCGTCAATCATCAGGAGCATTCAGTTCCCAACCTCCAACCTCTCATGCACAAACATCAAACAGCTACTCTCCAATTTTTCTGCAGTGGATTGATTGTGTTTCTCAGTTGCTTCGGACATATCCTTTTGCTTTTGAGTTCTCCTCAGCTTTCTTGGTGGACTTCTTAGACTGTGTGCTTTCTTGCCGCTTTGGAAACTTCTTATGTAACAGTGAGAAGGAAAGGCAGCAATTGAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCATACCTAGCTGAGTTGCGTGCTTCAGAGAGTGGTTCTCATGTGCATTATAACCTTTTTTATGAACCGTCAAAGCATAATGGTCCTCTTCTGCCTCCAGCAGCAGCTCTGGCCCCAACTTTGTGGCCCCAATTCCATCTCCGTTGGGTTTGTCCTGAAGAATCACAGTCTGGGGAGATTGAAGTAGAATGTAGGAGGATGGCTTTAAATTTCTGTGAGATGAGGAAGGCTAAAGAAGTGGCAGAGATGAAAGCCAAAGAAATTGCAACTGCAATGGAAACACTGAAAGTAGAACATAGAAATGAGAAGCAACTAAGAATATCAGCGATGAATATAGCCAAAAGGAAAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATTGGACGCAAGGTTTCCTTCTCTAGCAGCGATGACAGTATTGTTGATATTGAAATCTGTCCAGCTGAAGTAGCACGAAACTTGAAGTATTCTCTAACGGGAAAGGAATTTGATGATAAAAATGATTTATGCGCTTCAATAACAATTGCAGAAGACGACAATGATGCAAACAATGCTATTAGTCAAGTATGTGAAACTCTATGCCCATTTCGTACTCAAGATGGACACTGCAGGTGGCCAAATTCTGCTTGTGCTCAACGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAACTTTGATGCTCTCGATCAACTCTTAATTGATGATGATTATTTCAAGCCTGAGTAA 2541 0.4238 MASSTPGSSRSTSLRDDDSDAAKLEGTGSWDAIEWTKIEPIIRPVSRENLDFLLEAEQVKAQEYGVVLVNNNNVGTLMVTNFRFLFVSEKTAKVIALGTIPLATIEKFTKIAMKTHSALRQLDKTPSQRLLQVIGKDMRIIVFGFRPRTKQRRAIFEALLRLTKPARLWDLYAFVSGPSRLSNTNPKVRLLDEYFRLLGKGSYCGSINMIRSGSFTLSNSSWRISSVNSNYTMCQTYPFALIIPKSISDDEVLQASTFRARCRLPVVSWCDSGSGAVIARSSQPLVGLMMNMRSNADEKLVAALCNKLDDGSRRKLYISDARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTYGRASSDGMSSFLRNGGWTWGGGLLSSMSASVSTLGDSGWLLHIQNALAGSAWIAARVSIEKASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSVTGSGNTPSELSWQSSGNHPSSPMRQSSGAFSSQPPTSHAQTSNSYSPIFLQWIDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYEPSKHNGPLLPPAAALAPTLWPQFHLRWVCPEESQSGEIEVECRRMALNFCEMRKAKEVAEMKAKEIATAMETLKVEHRNEKQLRISAMNIAKRKNKENVVMKRAIQSIGRKVSFSSSDDSIVDIEICPAEVARNLKYSLTGKEFDDKNDLCASITIAEDDNDANNAISQVCETLCPFRTQDGHCRWPNSACAQRGSQFVGLKANFDALDQLLIDDDYFKPE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0642 846 SUPERFAMILY PH domain-like 53 175 - -
Lele47g0642 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 653 IPR029021 -
Lele47g0642 846 Gene3D - 59 163 IPR011993 -
Lele47g0642 846 Pfam Myotubularin-like phosphatase domain 191 591 IPR010569 -
Lele47g0642 846 PANTHER MYOTUBULARIN-RELATED 44 750 IPR030564 -
Lele47g0642 846 MobiDBLite consensus disorder prediction 1 23 - -
Lele47g0642 846 ProSiteProfiles Myotubularin phosphatase domain. 199 649 IPR010569 -
Lele47g0642 846 CDD PTP-MTM-like 262 551 - -
Lele47g0642 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Lele47g0642 846 MobiDBLite consensus disorder prediction 494 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0642 Lele-ChrLele47 10244802 10281481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0642 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 64.512 0.0 1104