Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0640 ATGGAGAATGATTTTGATTCCAAGTTGAGTATTCAGAGTAATTCGTCTAGTGATGGAAGTGTCCAGAGATCTCAGAGCATTCCTTTCCGAGCTCCTCAGGAGAATTGCACAATCCATGACTTTGAATTGGGAAAGATCTACGGCGTTGGTTCTTATTCTAAGGTCCTATATTCTGTAGGTTTATTTGTGTTGTTAAAAGAGAAGCAGTTGATAGGAAGTAGAAAAGGTGACGAACTTATGGCCTGTGACACTGAGGTTGTGAGGGCAAAGAAGAAGGACACAGGATCTGTATATGCGTTGAAGATCATGGACAAAAGGTTTATCACCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGATTAGTGCTTGATAAATTGGATCATCCTGGCATTGTGCGGCTATTTTTCACATTTCAAGACACGTATTCTCTGTGTACGTATATTGTTAAGGAGTTTCACTTTATATTGCAATCTTTTTCTAGTTGA 489 0.3906 MENDFDSKLSIQSNSSSDGSVQRSQSIPFRAPQENCTIHDFELGKIYGVGSYSKVLYSVGLFVLLKEKQLIGSRKGDELMACDTEVVRAKKKDTGSVYALKIMDKRFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTYSLCTYIVKEFHFILQSFSS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0640 162 ProSiteProfiles Protein kinase domain profile. 41 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0640 162 Gene3D Phosphorylase Kinase; domain 1 2 155 - -
Lele47g0640 162 SUPERFAMILY Protein kinase-like (PK-like) 14 153 IPR011009 -
Lele47g0640 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 147 - -
Lele47g0640 162 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0640 Lele-ChrLele47 9643688 9645710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0640 1 145 AGC Kinase Gene Family AT5G04510 60.000 7.80e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Lele47g0640 None None None