Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0636 ATGGGTTTAGTTCAGTTAAACAAAGTTGAGGATTTTGTGATTCTAAAACGACTGGCAGAACTTAATCAGCATATGCAAGATAAACAAAAGGTTAAGGATGGGGTTACAAGAGAAGGTCAAGATCTATCCATGGAGGATGAGTCAAAGATCAATGACAATATTGGAGGTGAAAATGATGGACGAATGGAGGTTATTGAGTTTCAAAATCACCTCAATGATCAAGTAGATATTATTAAAAAGAGCACTAAACAACAAATTCAAGGGCCTTTGGTTCGTTGGGAGAGGTTCTTGCCTGTTAGATCATTGAAAGTGTTATTGGTTGAGAATGACGATTCAACACGCCATGTGGTTTGTGCTTTGCTTCGGAACTGTGGATATGAAGTTGAAGCAGTTGAAAATGGTCAACAAGCTTGGAGAATCCTTGAAGATCTCACTGCTAATATTGATCTTGTTTTGACTGAGGTAGCTTTGCCATGTTTAACAGGCATTAGCCTCCTATCCAAGATTATGAGCCACAAAATGCGTAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAGTATATATCCAGAGGTGCAATTGACTTTTTAGTCAAGCCTTTACGAAAGAATGAGCTTAAAAACCTCTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTAGTAGTGGAAGTGAAAGTGGTGTTCGTACTCAAAAATCATTGAAGTCTGAAAGTGGAGAACATTCAGACAACAAGCATGGCAATTGTGATGAAGATGACATTGGAAGCATTGGATTGAATGCAAGAGATAAAAGTGATAATGGAAGTGGCACCCAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTAATAGTCCACGACCAATGTCCCCTTGGGAACAATTAGGGGATCCACCTATAGGTAGCTCTTGTGCCCAAGTTATTCATTCAATGCCTAAAACAACTGACAGCAATCAAGTGGCTACAACGAAGGATCATGAGACACAAGATGCATTGGACATGATGTTAGGCATAGATTTGGAGATAACAACACATAGACCAATCCCAACGTTGCAACCTTGTGGACGAGAAGATGTTCCATCAAATTTTGTTAATTGTAACATTAATGAGAGCTCTGAGAAGGAAAAAGTTTATGAAAAGGAAGAAGAGGGGCAAGTGGAACAAAATAACACTGAAAGATCAGTTAGAGAATTAAAAAATCAAGCAAATGGTCCAAGAAGTACTGTCACTAAGATTAATTCTAATTCTGATCCCGTCTTAAAAATACAATGTTTGGAGAACCCCAATGCAATGGTCTCTAATGTAGAATATAAGAATATATATGGAAACAAGGAATTGCCTTCATTTGATCAGTTCAGTCCAAAGAGTTTGAATGGGACCATAGATGTTGGAAGTAGCGTACAAGATCAAAATGTCTTAAAGCAATCGCATCGTTCTGCTTTCTCAAGGTACAACTCAGCATCTCATCAAGGTCCAACAGGAAATGTTGGTAGTTGTTCACCCATTGATAATAGCTCAGAGGCAGCAAAAACAGAATCGGTGCAAGGCATGAGAACTTATTTTAATAACATGCCTCCAAATATACATTCTAATAATGGAAGTAATAGCAACTATGAACAAGGTTCCAGTACAAATAATGACTTCACCAAACCTTCTGCCACCATTGATAAGCTAAAACAGAAAGCAACCATCAAATATATGCAGCCCTCTTCAACATCCCAAGCTGTTCAAAATATGTCTCTTCAACCTGTAGCTCAAGAAAATGGCGATAAGCAACATATACAAGTGCAGCACCATCACCATCACCATCATCACCACCACCATCACATGCATAATATGGTTGCTCATCAATTAGACAACCAAAATGGTCAGTCTCTACAAATGAAGACAGACACATCTCTCAATGAATCCTCAACTAATCCTTTGAGTGCACCCATTAAAAGCAATATTGGCAATGTCGATCATGGGAGTGCCTCAGGGAGTCACCATGGGAGCAATGTAGATCTAGGGAACAATCTTGCCACTTTACCTGGCAAAGTAGGAAACATGGAACATGATAATAGAATATCAAAAAAAGAAGGAACAACTAGTTTGATGAGACTTGAGTCTCCAAATGTAACTATCCAAAATCGATTTGCACGAAGGGAGGCTGCTTTGAACAAGTTTCGCCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCTCTATCAAAGCCGGAAGAAACTAGCTGAACAAAGGCCTCGAGTCCGAGGACAATTTGTACGGCATGGAATTTATGAAAATAAAGACAGATAA 2319 0.3872 MGLVQLNKVEDFVILKRLAELNQHMQDKQKVKDGVTREGQDLSMEDESKINDNIGGENDGRMEVIEFQNHLNDQVDIIKKSTKQQIQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVEAVENGQQAWRILEDLTANIDLVLTEVALPCLTGISLLSKIMSHKMRKNIPVIMMSSHDSMNIVFKYISRGAIDFLVKPLRKNELKNLWQHVWRKCHSSSSSGSESGVRTQKSLKSESGEHSDNKHGNCDEDDIGSIGLNARDKSDNGSGTQSSWTKMAVEVNSPRPMSPWEQLGDPPIGSSCAQVIHSMPKTTDSNQVATTKDHETQDALDMMLGIDLEITTHRPIPTLQPCGREDVPSNFVNCNINESSEKEKVYEKEEEGQVEQNNTERSVRELKNQANGPRSTVTKINSNSDPVLKIQCLENPNAMVSNVEYKNIYGNKELPSFDQFSPKSLNGTIDVGSSVQDQNVLKQSHRSAFSRYNSASHQGPTGNVGSCSPIDNSSEAAKTESVQGMRTYFNNMPPNIHSNNGSNSNYEQGSSTNNDFTKPSATIDKLKQKATIKYMQPSSTSQAVQNMSLQPVAQENGDKQHIQVQHHHHHHHHHHHHMHNMVAHQLDNQNGQSLQMKTDTSLNESSTNPLSAPIKSNIGNVDHGSASGSHHGSNVDLGNNLATLPGKVGNMEHDNRISKKEGTTSLMRLESPNVTIQNRFARREAALNKFRQKRKERCFEKRVLYQSRKKLAEQRPRVRGQFVRHGIYENKDR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0636 772 ProSiteProfiles CCT domain profile. 722 764 IPR010402 GO:0005515
Lele47g0636 772 FunFam Two-component response regulator-like PRR37 102 260 - -
Lele47g0636 772 SMART REC_2 102 217 IPR001789 GO:0000160
Lele47g0636 772 MobiDBLite consensus disorder prediction 385 401 - -
Lele47g0636 772 Coils Coil 18 38 - -
Lele47g0636 772 MobiDBLite consensus disorder prediction 485 559 - -
Lele47g0636 772 MobiDBLite consensus disorder prediction 402 420 - -
Lele47g0636 772 MobiDBLite consensus disorder prediction 242 267 - -
Lele47g0636 772 MobiDBLite consensus disorder prediction 385 420 - -
Lele47g0636 772 PANTHER TWO-COMPONENT RESPONSE REGULATOR 102 490 IPR045279 GO:0009736
Lele47g0636 772 MobiDBLite consensus disorder prediction 225 282 - -
Lele47g0636 772 Gene3D - 101 255 - -
Lele47g0636 772 ProSiteProfiles Response regulatory domain profile. 103 221 IPR001789 GO:0000160
Lele47g0636 772 SUPERFAMILY CheY-like 100 226 IPR011006 -
Lele47g0636 772 MobiDBLite consensus disorder prediction 225 241 - -
Lele47g0636 772 Pfam Response regulator receiver domain 104 215 IPR001789 GO:0000160
Lele47g0636 772 Pfam CCT motif 722 763 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0636 Lele-ChrLele47 8377039 8393769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0636 90 495 Response Regulator Gene Family AT5G60100 43.990 1.39e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele47g0636 Response_reg 4.6e-21 CL0304