Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0628 ATGCAAAACTTTGCATCCACCTGCTTCAGTCAAGAACATAGCCCTATCAATGGAGATCTTTGCTTTCATACTACCAACCAATCCTTATTCTCTGGGTCTCTTCCTGCTTATTACCAGACGCCATCAAGTAGTACTGTGGGTTCATCAAAATCACCTAAGTCATCAAATTTAAGCAATAGGAAGCCATCTATAAATATTACCATCCCTCCGATGGGCTTAAGGATAAGCTCCTCATCATCATCATCATCGTCGGATGTTACAGAGGACAAGCACTACCGAGGGGTTCGACAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGTGACCCGAATCGAAAGGGATCGAGGGTGTGGCTTGGAACCTTCGATACAGCCATGGAAGCAGCAAAAGCATATGATAGAGCTGCGTTTAAGATGAGAGGAAGCAAAGCTATACTGAATTTCCCTCTTGAGATTGGAGCAACAATAAGTTCTGAAGAATCAAATTCATCAACAGTGGAAAAAGTTGTTGGTGAGAAAAGGGGAAGAGAGGAAGAAGAGAGTGATGAACAGGACAATAATGAAGAATTTAAGAAGATGAAGAAGGAGAAGGAAGAGGCACTGTCACCCACAGGTGGGGTTGTTTCTTCTTCGTTTTCTTCTACTGCAACAGTTGGTCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGATTCTGAAGTTGCCAACACTATTTTCAGTGTTCCTCCGTTATCGCCGTTATCTCCTCCCATGATGATTGTGACGTAG 768 0.4479 MQNFASTCFSQEHSPINGDLCFHTTNQSLFSGSLPAYYQTPSSSTVGSSKSPKSSNLSNRKPSINITIPPMGLRISSSSSSSSSDVTEDKHYRGVRQRPWGKFAAEIRDPNRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPLEIGATISSEESNSSTVEKVVGEKRGREEEESDEQDNNEEFKKMKKEKEEALSPTGGVVSSSFSSTATVGPLTPSCWKGFWDSEVANTIFSVPPLSPLSPPMMIVT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0628 255 MobiDBLite consensus disorder prediction 41 85 - -
Lele47g0628 255 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele47g0628 255 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Lele47g0628 255 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Lele47g0628 255 PANTHER DNA-BINDING DOMAIN 56 198 IPR044808 GO:0003700|GO:0009873
Lele47g0628 255 CDD AP2 90 149 IPR001471 GO:0003700|GO:0006355
Lele47g0628 255 MobiDBLite consensus disorder prediction 166 201 - -
Lele47g0628 255 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Lele47g0628 255 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Lele47g0628 255 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Lele47g0628 255 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Lele47g0628 255 Coils Coil 176 196 - -
Lele47g0628 255 MobiDBLite consensus disorder prediction 41 93 - -
Lele47g0628 255 MobiDBLite consensus disorder prediction 159 213 - -
Lele47g0628 255 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0628 Lele-ChrLele47 7920965 7921732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0628 20 255 AP2-EREBP Transcription Factor Family AT5G61600 40.756 1.63e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele47g0628 AP2 6.6e-16 CL0081