Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0623 ATGGACATCCCTGACGGCGTGAACGTGAAGATTCACACGAAGGTCATCGAGGTAGAGGGGCCTTGCGGCAAGCTTGTGCGTAATTTCAAGCGCCTGAATCTGGATTTCCAGTTGATCACTTACGATGATGGCAAGAAGAAGCTCAAGGTTGATGACTGGTTTGGGTCTCGGAAGACCTCCGCCGCCATCAGAACTGCTCTCAGTCACGTCGGAAATCTAATCACCGGCGTCACGAAAGGCTACCGTTATAAGATGAGGTTCATGTATGCTCATTTCCCGATCAACGCATCCACAACTAACAACAACAGGTCCATTGAAATCCGTAACTTCCTTGGGGAGAAGAAGAACCCCTTTTCTTCATTTGTTGTTCATTATCATATAATTCTTAGTGTTCTTAATCCTGGGTATGTAAATGTTGCAATTTATATCAGTTCTATAATCCCAAGGAAAATCACAGTTTCTATATTCTTATCTACCGGTTTCCTGCTCTCTGCTCTGTGTTGTCTTCTTGTTGGAAGGCCATCGCAATTGTATCATTAA 540 0.4407 MDIPDGVNVKIHTKVIEVEGPCGKLVRNFKRLNLDFQLITYDDGKKKLKVDDWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFMYAHFPINASTTNNNRSIEIRNFLGEKKNPFSSFVVHYHIILSVLNPGYVNVAIYISSIIPRKITVSIFLSTGFLLSALCCLLVGRPSQLYH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0623 179 FunFam 60S ribosomal protein L9 1 80 - -
Lele47g0623 179 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 130 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lele47g0623 179 Gene3D - 1 80 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lele47g0623 179 Gene3D - 81 154 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lele47g0623 179 SUPERFAMILY Ribosomal protein L6 2 80 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lele47g0623 179 SUPERFAMILY Ribosomal protein L6 81 116 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lele47g0623 179 Pfam Ribosomal protein L6 3 80 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0623 Lele-ChrLele47 7787779 7788700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0623 1 115 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 75.862 8.18e-61 186